Lates calcarifer (barramundi perch): 108875679
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Entry
108875679 CDS
T04895
Name
(RefSeq) protrudin isoform X1
KO
K19368
protrudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108875679
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GFIT
Motif
Pfam:
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
108875679
NCBI-ProteinID:
XP_018520273
UniProt:
A0A4W6CJP2
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Position
LG5:complement(22142546..22151522)
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AA seq
425 aa
AA seq
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MTMHSAGVSQDASQGTGERGELVHSLSKETSGSPDASELGSPRCNPNFDLLNMVESYKRM
AMYLEPVADAVELSRFLLGWKMPLCSLLVCIFLNVFFCTVNEVGWFSVGVVAVTVPAALG
YLQDRCGGTASEAELQRRRYHAVHRRDLQTVHLTKQEAMLEVKDLLKHLDDMLSSACQSA
DAIYKVLYWDSHTRSSRFYGGVLIVVCLLYVAPVGWVLAGLNSAIFLWNRDFCRVLLDLR
KFFCMGQTKTSEGLCEEQEQGNLLDRTPTPTSLEDLSPGSVEEAEEAEPDDEFKDAIEEH
SISLQETPLVLVEDDDGPLGAPEYDTISENGLLSRNEPIRSKVSKLTEKLRKRYPTTSTG
NCSSCNAVFSVLKKRRNCSNCGNSFCSRCCSFKVLRSCMGATAPEAQRETVFVCAACNSS
LIKLQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcacagtgccggagtgtcccaggatgcttcgcagggtacaggggaacgtggg
gagctggtacactcattatccaaagagacctctgggtctccagatgcctctgagttgggg
agccctcggtgtaatccaaactttgacctcctcaacatggtcgagtcttacaagagaatg
gctatgtatctagaaccagttgcagatgcagtggaactgagccgcttcctgcttggatgg
aagatgcccctgtgctctctgcttgtctgtatattccttaatgtctttttctgcacagtt
aatgaagtgggttggttctcagtgggtgtggtggcagtgacagtgcctgctgccttgggt
tacctgcaggacaggtgtgggggcacagcctcagaagctgagctccagaggaggcgctat
cacgctgtgcaccgcagagacctgcagacagtgcatctcaccaaacaggaggccatgctg
gaagtaaaagacctgttgaagcacctggatgacatgctgtcctctgcctgtcagtcagca
gacgctatttacaaagtcctttactgggatagtcataccaggtcatcaaggttctatgga
ggggtgttaatagtggtgtgtctgctctatgtggcgcctgtgggctgggtgctcgctggg
ctcaacagtgccatcttcctgtggaacagagacttctgcagagttttattggacctaaga
aagtttttctgcatgggccagaccaagacctctgaggggctgtgtgaggaacaggaacaa
ggcaacttgctggacaggacccctacaccaactagtctggaggacctgtctcctggcagt
gtggaggaggctgaggaagcagaacctgatgatgaatttaaggatgccattgaggaacat
tcaatttccctgcaggaaacccctttggtcttagtggaggatgacgatgggcctctcgga
gccccggagtatgacaccatctctgaaaatggtctcttgagccgcaacgaaccaatacgc
agcaaagtgtcaaaactgacagagaaactgcgtaaacgctaccccaccaccagcacaggc
aactgttctagttgtaatgccgtcttctcagtgctgaagaaaaggaggaactgcagtaac
tgtggcaacagcttctgttctcgatgctgttcttttaaggtgctgagatcttgcatgggg
gcaacagctccagaggcccagagagagaccgtgtttgtttgtgctgcctgtaattcttct
ctcatcaagttacagtga
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