Lates calcarifer (barramundi perch): 108875683
Help
Entry
108875683 CDS
T04895
Symbol
tmc6b
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108875683 (tmc6b)
03037 Cilium and associated proteins [BR:
lcf03037
]
108875683 (tmc6b)
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108875683 (tmc6b)
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108875683 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6821
Motif
Other DBs
NCBI-GeneID:
108875683
NCBI-ProteinID:
XP_018520287
UniProt:
A0AAJ7PEA5
LinkDB
All DBs
Position
LG5:complement(22625497..22639864)
Genome browser
AA seq
836 aa
AA seq
DB search
MAQNVNFDLNHPLMEAGLESPVDEEGVHDSFNQLIAEQSQNGGLSDAYELQQLQRQLDEE
GQDNVAYLTSPDHDFRDRRQGQRGVEWEDDERPIDPLVAERWSSATLKILSSMPSRTIGR
NRGAIISQYYNKTMQLRRRRQSRPAIRDFSHSARPSIRGYGMEADTPDADGAEMTKRERL
VNNLQNLSVSDRVRMLRGMPLSVAEKSELRRLALQKERRTLSGKRIPCCSRLKYYIIIAM
RQSWYSWLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFLKTLLFFNLFLFLVMGAFLVLP
QAVHPPTPPAEKCIFTGLELLTGAGSFSDTVMYYGHYSNYTLHRSCRDDGGGQNISVFNR
TRPDCVSKHLSYNMPLAYFFTIGVAFFITCIILVYSMSKSFGRSFRIDKSHSILAMKVFC
SWDFKVIKKTSVKLMSENICTQLKELLAEVNHKHVKNTVGQRLWRLMVHGLAWAICIAGT
TACVISIYFFSDYMHQNSAWGATDAQNIQNNLSLLALPVVVSLINLLLPGLFNLAAWMED
YQSPSVRTYVAIGRNLMLKVSVLGVLCYHWLDRVAAGTTFKVKCWESFVGQELYRFLLMD
FIFTLLDTLLGEFLWRLFSEKVLKRRRKPVFDIARNVLELIYGQTLAWLGVLFTPLLPAV
QILKLLLLFYIKKSSVMMNCQAPSKPYRVSQMTTIFITLLCFPSFLGVSVCVTYTMWSIP
PSSSCGPFRGLQKMLQAGKRWVEQLEEDNPNLSVLARAHSYLVENPFFLFVGAGIFLIVI
YFHSQVVDGQRKIISLLQEQIKNEGDDKKFLITRLQSIHEKKRTPARRLRSQDSSC
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaacgttaactttgacctgaaccaccctctcatggaagctggactggagagc
ccagtggacgaggaaggtgttcatgactcgttcaaccagctgatagcagagcagagtcag
aatggaggactgtctgacgcctatgagctgcagcagctgcagagacaactggacgaggag
ggtcaagataatgtggcctacctgaccagccctgaccatgactttagagacaggaggcag
ggacaaagaggggttgaatgggaggatgatgaaagaccgatagaccccctcgtagctgaa
cgctggtcctcggccaccttgaagatcctgtcgtccatgcccagtcgcaccattggccgc
aacaggggagccatcatctctcagtactacaacaagaccatgcagcttcggagacgcagg
cagagcagacctgccatccgagacttctctcactctgccaggcccagcatacgaggctac
gggatggaggcagacactccggacgcagatggtgcagagatgactaaaagggaacgtttg
gtgaacaacctgcagaacctttcagtaagcgaccgagtcaggatgctcagaggaatgcca
ctcagcgtggccgagaagagtgaactcaggaggttagcattacaaaaggagagacgcaca
ctttctggcaagcggatcccctgttgcagtcgactcaaatattacatcataattgctatg
agacagagttggtacagctggctgtccttccttcactccctccagctgtggcaagtggca
ctcaagagagttagcgggcgtttcggcactggagtcctctcatacttcctgttccttaag
accctactcttcttcaacctcttcctgttcctggtgatgggtgcgttcctggtgctgcct
caggcagtgcaccctccaacgccgcctgctgagaaatgcatcttcactggactggagctt
ctcaccggagcgggctctttctcagacacagtgatgtactatggacactacagtaactac
acactgcataggagctgcagggatgatggtggagggcagaatatctctgtgttcaataga
accaggccggactgtgtgtcgaaacacctgtcctacaacatgccacttgcatacttcttc
actataggagtggccttcttcatcacatgtatcatccttgtgtacagcatgtccaagtca
ttcggccggagcttccgaatcgacaaatctcacagtatcctggccatgaaggttttctgc
tcctgggacttcaaggtcatcaagaaaacttctgttaaactcatgtctgagaatatctgc
acccagctcaaggagctgttggcagaggtgaaccataaacacgtcaagaacactgtgggc
cagaggctgtggagactgatggtccacggcctagcatgggccatctgcatagcaggcacc
actgcctgtgtgatcagcatttacttcttctctgattacatgcaccagaattctgcttgg
ggtgctactgatgcccagaacatccagaacaacctcagcctgctggctctgcctgtggtg
gtgtcgctcatcaacctgctgctgcccggcctgttcaacctcgcagcctggatggaggac
taccagtctccctctgtacgcacgtatgtcgccatcggcaggaacctgatgttaaaagtg
agcgttcttggcgtcctgtgttaccactggctcgatcgcgtggctgctggtacaaccttt
aaggtgaagtgctgggagagttttgttggccaggaactttatcgcttccttctcatggac
tttatcttcactctgctggacaccttgttaggagagtttctttggaggttgttttctgag
aaggtgctgaagaggaggaggaaaccagtctttgacattgccaggaatgtccttgagctc
atctatggacagactttagcctggttgggtgttctcttcactcctctcctgcctgcagtg
cagatacttaaactcttgttgctcttctacatcaagaagagcagtgtcatgatgaactgt
caggctcccagtaagccatacagagtcagccagatgaccaccatcttcatcactctcctc
tgcttcccctccttccttggtgtctccgtgtgtgtcacatacaccatgtggagtatcccg
ccctcctcatcgtgcggtccgttccgcgggctccaaaagatgctccaggcagggaagcgc
tgggtggaacaactggaagaagataatcccaacctgtctgtgctggccagggctcactca
tacctggtggaaaatcctttcttcctgtttgtgggagcaggcatctttctgatagtcatc
tacttccacagtcaggtggtggacggtcaaaggaagatcatcagtttattacaggagcag
ataaaaaatgagggagatgataaaaagtttctcatcactcgcctccagtccatccatgag
aaaaaacgaacccccgctcgaagactcagaagtcaggactcttcatgttga
DBGET
integrated database retrieval system
