Lates calcarifer (barramundi perch): 108875723
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Entry
108875723 CDS
T04895
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108875723
03037 Cilium and associated proteins [BR:
lcf03037
]
108875723
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108875723
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108875723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Sec1
DUF4376
Motif
Other DBs
NCBI-GeneID:
108875723
NCBI-ProteinID:
XP_018520346
UniProt:
A0AAJ7PES8
LinkDB
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Position
LG5:complement(23410535..23422836)
Genome browser
AA seq
994 aa
AA seq
DB search
MTSYSNGGFFNPAYHDSETLEIDRRSSSKTHHTNPYAREDPAWRGDKAEAYNTPVGQTGG
DDALARVPWGGWQEESWRGRESIPMGLISTRPGSPSWQHDLNHSTFQIDPDSHYDRSPSV
RLPSTVSGNMTMRWRGLTMRRMSMFPNTDPAHRVFTEDAIRNEMENEEQNLVKELVAMST
RDRIRAIRDLPMSFEEKKHIRSQVLAFKSSKQSRQLTCFADCSENVSLFFRRCGYGIRSA
RQTLELWHGIMKEIGGKFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDPLPNI
PPNVSFRGLEILTGAGYFNYTVMYYGGYSNETLVGLVEYNMQLAYFFTIAVYMVLCGIVL
IFSMASSFKTNYVLAEPTSSGAWQLLCSWDFSMTNERAVRQRKNNLRVQLKESLSEKAQR
ELLTLSEKLKHFGVHLGSWLLSTGLAVGCGASIYFLCQYEQQRATDATDWSLLQEAETLL
VPFVVSLMNLVVPLLYSLFNKFEQYSSQRRQIYALVVRNVLLRMSILGVLCYYWMNVVVI
KFSCWESMVGQALYRLVIVDFLFITLGSFFGEFLSNVIGTRILPRLGVPEFDIARNVLEL
IYAQTLAWIGIYFSPLLPAIQIVKFFILFYLKKISLTQNCQPPRRTGRAAQMQTTFIALL
FFPFFVGALSMVAYTAWRLTPSEQCGPFRGLNNTFSVVGIWIDDLEKIPGSQWVVWIYQN
VIRSEIFYFLITIIILVIIYIFWQVAQGRKELIGLLRQQIVNEGKDKSFLLDKLQNLQKS
QPNKRPKQKNQKKHTKRRSDDHSSGAQSNSNAMVQALLARQQIEEEEDRRHAGGVPVPSD
ISTSSALMQALLARQRADGQDEDLYKMPDKHSTSSSALTQAIQARQRAEGQGGSEYYSTA
GFSENPANRSSAVMQAIQARQRAEENGAANTDALPSPVSGVMMQVMQARQRAEEEDRFLW
APAPPQNPAPSGSSALIQAMLARQQAQNEYDDGY
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaacggtggatttttcaaccctgcttaccatgacagcgagactctg
gaaattgatagacggtcttcgagcaaaacccaccacactaacccctatgccagggaagac
ccagcctggcggggggacaaggcagaggcatataacactcctgtgggtcagaccggaggt
gatgacgctttggcgagagtaccctgggggggctggcaggaagagagctggagggggaga
gaaagtatccccatgggcctcatctcaacacgccctgggagcccctcatggcagcatgat
ctcaatcacagtacatttcaaatcgaccccgactctcactatgatcgatcgccatctgtt
cgactcccctctacagtatcaggtaacatgacaatgcgatggaggggactcacaatgaga
aggatgagcatgtttcctaacactgatcctgcacatcgagtgttcacagaggatgccatc
aggaatgagatggagaatgaggaacagaacctggtcaaggagctcgttgccatgtcaaca
cgagaccggatccgggccattcgggaccttccaatgagctttgaagaaaagaaacatatc
aggagccaagtgctggcattcaagtcttccaagcaatctcgccagctcacatgttttgca
gattgctctgagaatgtctcactgtttttccgcaggtgcggctatggcatcaggtcagcc
aggcagaccctggaactgtggcacggcatcatgaaagagattggtggcaaatttggcacc
agtgtcctgtcctactttgtgttcctcaagtggctgctcatgttcaacatcttctccttc
ctggtcaactttggctttatcaccatcccgctgcttgtttatgaccccttacccaacata
cctccaaatgtgagcttcagaggattggagatactgactggagctggttacttcaactat
actgtcatgtactatggtggctacagcaatgaaacacttgtgggtttagtggaatacaac
atgcagctggcctatttcttcaccattgcagtctatatggtgttgtgtggaattgtactt
attttcagcatggcaagctcatttaagacaaactatgtactagcagaaccaacttcaagc
ggtgcatggcagcttctatgcagctgggattttagtatgaccaatgagagagcagtgaga
cagcgcaagaataaccttcgtgtccaactcaaggagtctttgtcagaaaaggcccagagg
gagctgctaaccctctctgaaaaactgaagcacttcggggttcatctgggttcctggctt
ctctccactggcttagctgttggctgtggagccagcatctactttctctgccaatatgaa
cagcagcgagcaacagatgccaccgactggtctctgcttcaggaggcagagactctcctg
gttccctttgtggtgtctctgatgaacctggttgtcccgctcctctactccctcttcaac
aagtttgagcagtactccagccagcggagacagatctacgctctagtagtcagaaatgtc
ttactcaggatgtccattctgggtgtcctgtgttattactggatgaatgtggtggtaata
aagttctcgtgttgggagtccatggtaggacaggctttgtaccgtctggtcattgttgac
ttcctttttatcacgttgggatccttctttggagagtttcttagcaatgtgattgggacc
agaatactgccacgtctgggggttccagagttcgacatcgccagaaatgtgcttgaactc
atctatgcacagactctagcctggattggaatctacttctctcctctgctgcccgccatc
cagattgtcaaatttttcatcttgttttacttgaagaagatcagcctgacccagaactgc
cagcctccacggcgaacgggcagggcagctcagatgcaaacaaccttcatcgccctcctc
ttcttccctttctttgtgggagccttgtccatggttgcatacactgcctggagactgact
ccctcagagcagtgtggtccttttcggggactcaacaataccttcagtgtggttggaatc
tggatagatgatctggagaagatccccggttctcagtgggttgtttggatctaccaaaat
gtcatcaggagtgaaatcttctattttcttatcacaatcatcatcctggtcatcatatac
atcttctggcaagttgctcagggccgcaaggagcttattggtctactgagacaacaaatt
gttaatgagggaaaagacaaatcattcttgttagacaagctccagaacctccagaaatct
cagcctaataagagacccaaacagaagaaccaaaaaaagcacaccaaacggcgttcagat
gaccactcttcaggtgctcaatccaactcaaacgccatggttcaggctttacttgctcgc
cagcaaattgaagaggaagaagacagacgtcacgctggtggagtgcccgttccctccgac
atctccacctccagtgctctgatgcaggccttgttggcccgtcagagagctgacggccag
gatgaagatttgtacaagatgcctgataaacactcgacatcctccagtgccctcacacag
gccatacaagccagacagagggctgagggtcaaggggggagtgaatactacagtacagca
ggtttttctgaaaaccctgccaacagatccagcgctgtcatgcaggcgatacaagccaga
caaagagcagaggaaaacggagcagctaatacagatgccttgccatctcctgtgtcaggt
gttatgatgcaggtcatgcaggccagacagagagcagaggaggaggacaggtttctgtgg
gcccctgctccaccacaaaacccagccccctcaggctccagtgctctcattcaggccatg
ttggcccggcagcaggcccagaacgagtatgatgatggttactga
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