Lates calcarifer (barramundi perch): 108875730
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Entry
108875730 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: lysyl oxidase homolog 4-like
KO
K00280
lysyl oxidase-like protein 2/3/4 [EC:1.4.3.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108875730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lysyl_oxidase
SRCR
SRCR_2
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
108875730
NCBI-ProteinID:
XP_018520359
UniProt:
A0AAJ7LFE1
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Position
LG5:22106274..22123912
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AA seq
912 aa
AA seq
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MLCLSSLSTLLLLLLLYPPPLSAQEVLVRLAGVGRRGANEGRVEVFYNGAWGTVCDDEVD
LNLANVVCRQLGFQRSFTWAHSAKFGEGQGLIWLDNVRCRGTELSIAECLSNGWGVNDCT
HAEDLGVICSPERRPGFPPVSLGEATSSSRQQQSQPRQRNPLPQSVSPPAPPVAHISSSS
ARGHEIALHRNPSSTRRSSVSPQENGHEIQILRRNRGGSRTTQQVSQALPQGHELPSHLI
NGAAYRQRQEMARSSPQAVRREAEGRXNRQQQPHSQLQSERGSDRNQQLSGNHVEPDPGY
PDMGLEADAQYTQGSHRVHLEEVRLRPVLGNHGGLVTEGVLEVKHAGRWRHVCNQGWDMS
SSRVVCGMLGFPAAEAFDQISYRKQWESKLADSSRLRTQITKKAYWVEKVQCQGVEASLS
QCQAQLSLPRSDVPCRGGMHAVVRCIPGSQFTRNGRAPAPPPVPPVVRLKAGPRLGEGRV
EVLQEGKWGTVCDHLWDMTAASVVCRELGFGTAKEALTKAQLGQGTGPIHMNSVQCTGRE
KSITECRYRVVPLYSCKHTQDVAIRCNVPNTGMQTTVRLAGGREPAEGRVEVLMDVGGVR
RWGSVCSENWGINEAMVVCRQLGLGFASRAHQETWYWPGSSDAGEVVLSGTHCIGTEMSI
QQCRRNTHVYCPRGGEGRAAGVTCVETAPDLVLDAQLVQETAYLEDRPLHLLTCANEENC
LSSSAARMNWPYGHRRLLRFSSRIMNLGRADFRPRASRESWIWHQCHRHYHSIEVFTHYD
LLTLNGTKVAEGHKASFCLEDTYCPDGIHKRYACYNMGQQGISVGCWDTYRHDIDCQWVD
ITDVRPGEYIFQVEVNPSLDMAESDFQNNVMRCRCKYDGARVYMSGCHAGDAYSAEVEDL
FDHQRQISNNFL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctcagctccctgtccacactcctcctcctgcttctcctctacccccctccg
ctgtcagctcaggaggtgcttgttcgtctggcaggtgtagggaggcgcggtgcaaatgag
gggcgtgtggaggtgttctataatggagcgtggggcaccgtgtgtgatgatgaggtggat
cttaacctggccaacgtggtgtgcagacagttgggctttcaacgcagctttacttgggcg
cacagtgccaagtttggtgaggggcaaggtctgatctggttggacaatgtgcgctgcagg
ggcacagagctctctattgcagaatgtctctccaatgggtggggagtcaatgactgcacc
cacgctgaggacctgggggtcatttgcagcccagaaaggagacctggcttccccccggtc
tcgttgggggaggccacttcatcttccaggcaacaacaaagccaaccaagacagagaaac
ccactgccacagtctgtgtcccctccagctccacctgtggcccacatctcctcttcttct
gcaagaggtcatgagattgccctccatcgcaacccatcctctacccgtcgcagcagcgtc
tcaccacaggaaaacggccacgagatccagatcctgcgacggaatcgaggaggttccaga
acgacccagcaggtgagccaggctttgccacaaggacacgagctgccttcacatctgata
aatggtgcagcctacaggcagaggcaggagatggcgcggagcagtccacaagcagtgaga
cgggaggcagagggcaggntgaacaggcagcagcagcctcattcccaactccagtctgag
agggggagcgacaggaatcagcagctcagtgggaaccatgtggaaccagacccaggttat
ccagacatgggactggaggctgatgctcagtacacacagggatctcatagggttcactta
gaggaggtgcgtctacggcctgtgctgggaaatcatggcggtctggtgacggagggagtg
ctggaagtgaagcatgctgggaggtggcgtcacgtgtgtaaccagggatgggacatgagc
agcagcagggtcgtctgtggcatgttaggattccctgctgcagaggcgttcgaccaaatc
agctacaggaaacagtgggagtccaagttagctgattcatccaggctgaggacacagatt
actaaaaaggcctactgggtggagaaagtgcagtgtcagggtgtggaggcctctctgtca
cagtgtcaggcccagctgtccctccccaggagtgatgtgccatgcaggggaggcatgcat
gctgtggtccgctgtattcctggatcccagttcacacgtaatggaagagcgcctgcacca
cctcccgtgccgcctgttgtgcgtctgaaggcagggccccgtcttggggagggccgtgtc
gaggtgctgcaggagggcaagtggggcactgtgtgtgaccacctgtgggacatgactgca
gccagcgtggtctgtagggagctgggcttcgggacagcaaaggaggctctcactaaggct
caactgggacagggtactggtcccatccacatgaacagtgtccagtgcacaggcagggag
aagtccattacagagtgtcgctacagagtggtgccactttacagctgcaaacacacccag
gatgtagcaatccgctgcaatgtgcccaacactggcatgcagaccacggtgcgcctggca
ggaggcagagagccagcagagggccgtgtggaggtgctgatggatgtcggaggagtgagg
cgctggggatccgtctgcagtgagaactggggcatcaatgaggccatggtggtgtgtcga
cagctgggactgggatttgcctcaagagctcatcaggaaacctggtactggcctggctcc
tcagatgctggggaggtggtgctgagtgggacccactgcatcggcactgagatgtctatc
cagcagtgtcgcagaaacacacacgtctactgtcccagaggaggagaaggcagggccgca
ggagtcacatgtgtggagactgctcctgacctcgtcctagacgctcagcttgtccaagaa
acagcctacctggaggatcgacccctccacctgctgacctgcgccaatgaggagaactgc
ctgtcctcctcagccgccaggatgaactggccctacggacaccgccgcctgctgcgcttc
tcctctcgcatcatgaatctgggccgcgccgatttccgaccccgggcctccagagaaagc
tggatatggcaccagtgtcacaggcactaccacagcattgaggtgttcacccactacgat
ctgctcaccctcaatgggaccaaggtggctgaaggtcacaaagccagcttctgtctggag
gacacctactgccctgacggtatccataaacggtatgcctgctataacatgggacagcag
ggtatctcagttggctgctgggacacataccgccacgacattgactgccagtgggtcgac
atcacagatgtacgacctggtgaatacatctttcaggtggaggtcaacccttctttagac
atggctgagtctgatttccagaacaacgtgatgcgatgtcggtgcaagtacgatggagca
cgtgtttacatgtccggatgccatgcaggtgatgcttacagcgcagaggttgaggacttg
tttgaccaccaacgtcagatttccaacaacttcttgtga
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