Lates calcarifer (barramundi perch): 108875769
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Entry
108875769 CDS
T04895
Symbol
cacng5a
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108875769 (cacng5a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108875769 (cacng5a)
04261 Adrenergic signaling in cardiomyocytes
108875769 (cacng5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108875769 (cacng5a)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108875769 (cacng5a)
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
DUF716
DUF4064
Motif
Other DBs
NCBI-GeneID:
108875769
NCBI-ProteinID:
XP_018520414
UniProt:
A0A4W6FU83
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Position
LG5:19513026..19533868
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AA seq
277 aa
AA seq
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MSLCGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGVILPLNQSTEIRMSLHSGLWR
VCFLAGEEKGRCFTIEYVMPTNVQMTSESTVSVLKMIRSATPFPLVSLFFMFIGFVLSNI
GHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISNINDEMLNRTKTNEAYFSYKYGWSFA
FAAISFLLTETAGVMSVYLFMKRYTAEEMYRPHQGFYRPRLSNCSDYSGQFLHPDAWAGR
GRSPSSISSEASLQMNSSNYPALLKCPEYEQMSSSPC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcctatgtggcaggaaggcgctgacgttgctgagcagcgtgttcgctgtttgcggc
ctgggcctgttggggatcgctgtgagcaccgactactggctctacctggaggagggcgtc
atccttcccctcaaccagagcaccgagatacgcatgtccctccactctggcctctggagg
gtttgcttcctggctggggaggagaaagggcggtgttttaccatagagtacgtgatgccc
actaatgtccagatgacctctgagtccactgttagcgtcctcaagatgatccgttctgcc
acacctttccccctggtcagccttttcttcatgttcatcggttttgtactcagtaacatc
ggccacatccgaccacatcgcaccatcctggcctttgtttctggaatcttcttcatcctg
tcaggcctgtctctggttgttggtctcgtcttgtacatctccaacatcaatgatgaaatg
ttgaacaggaccaaaactaatgaggcctatttcagttacaagtacggctggtcattcgcc
tttgctgccatctccttcctgctcaccgagacggcaggtgtcatgtcggtgtatctgttc
atgaagcgatacacagcagaggaaatgtatcggccccatcagggcttctaccggcctcgc
ctcagcaactgctccgattactccggccagttcctccacccagacgcctgggccgggcgg
ggccgcagcccctcctccatctcctctgaggcgtccctccagatgaactcctccaactac
cctgccctcctcaagtgtccagagtatgaacaaatgtcctcctcaccttgctga
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