Lates calcarifer (barramundi perch): 108875810
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Entry
108875810 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 24-like
KO
K21841
TBC1 domain family member 24
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108875810
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108875810
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108875810
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108875810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLD
RabGAP-TBC
RabGap-TBC_2
PreP_C
Motif
Other DBs
NCBI-GeneID:
108875810
NCBI-ProteinID:
XP_018520463
LinkDB
All DBs
Position
LG5:complement(18054270..18059354)
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AA seq
748 aa
AA seq
DB search
MIHVPRTPEFSNCGNINSIAAHLSSDQDLNSLVGGRGRQRSHSYHSAEDSKNYGVQTETV
KTCLRPRSRSFYSYETSELYSNYDVGNFDMASPLRQREESLHQHQVTKKENREWGGAGLP
VTSKKTKSKLNKSSPSRELNGSKSVAMMTISESDNWEICSSLGMTYGQFVDWEKIDPEAA
KRYQQILNSEHQQLKTMGREGFWAMPHTLRAKTYYHIIHSMNCSRSGTSDRDAYHELAKK
LFGEQKISTHPVPEYMEAGEIPRYCLNKAGLNSVKKILLCLGKYFPDMNFCPILPALVSL
ILHFSQDEAECFHSMSQLICYNDPNKRYIDQTFLTYRASCMTFGDLANRCCEGIRKLIAS
SHQNLFEFYSDWIMWIFAELPFIYAIRVLDVYLLEGYKVLYRVALALLSLYKVSVSSRVA
DVEDFRTDMKRFVQNVARHCTIEKLLERAFMIPMATRRELNLLFNANKDSLMQKGVSIHQ
KRQSVETVDFTKFSSSVVTATEMRVVWAWIPERFALFSPIRLFSTAEHGRSLASFYSHVE
GHEPVVLMIKTVDEEVFGAFLSTDMTERRKHDCQGLAYFGTGECFVFTLRPSMERYQQAM
VNIMTRRAPPQQVGISNGACSLVPNGGSCPVTSTTTATPLICPAGTPQDPSYLTIPFTAP
SEEPTDAKEPKRQKQKEASMFIAGNDSQLIIGGDGGHAVCLQDLEGGYTESCDTFKSIPL
CKGPFKIQSLEVWGIQNSISFSNCFPSQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgattcatgttccaagaacaccggagttctccaactgtgggaacattaattcaattgca
gcacacctctcttctgaccaagacctgaactctttggtaggaggcagaggcaggcagagg
tctcactcctatcacagtgcagaggacagtaagaactatggtgtgcagacagagactgtc
aaaacctgtctaagacctcgctccaggtccttttacagttatgagacgtcagagctttac
tccaactatgacgtgggaaactttgacatggccagtccactgaggcagagagaggagtcc
ctacaccagcatcaagtgaccaaaaaggagaatagagagtggggtggggctggtttgcca
gtcacctctaagaagaccaagtctaaactaaacaagtcttcaccctcgagagaacttaat
ggcagcaagtcagtggccatgatgaccatctctgagtcagacaactgggagatctgctcc
agcttgggaatgacatatggacagtttgtagactgggagaagatcgatcctgaagctgca
aagagataccaacagatcctgaatagcgagcaccaacagctgaaaactatgggccgagag
ggattctgggccatgccgcacacactgagggccaaaacctactatcacatcatccacagc
atgaattgcagtaggtctggcacttctgacagagatgcctaccatgaactggccaagaag
ctctttggagaacagaaaatcagcacccaccctgtcccagagtacatggaggcaggagaa
atacccagatactgtctcaacaaagctggcctgaactctgtcaaaaagatcctcctttgt
cttggcaaatacttcccagacatgaacttttgccccatcctacctgccttggtctcccta
atcctccacttcagccaggatgaagctgagtgtttccacagcatgtcacaacttatctgc
tacaatgaccccaacaagcgttacatcgaccagaccttcctgacctaccgtgcttcctgc
atgacctttggagatctcgctaacaggtgttgcgagggcatccgtaagctcatcgccagc
tctcaccaaaacctctttgagttttactctgactggatcatgtggatctttgctgagctt
ccgttcatatatgccatcagagtgctggatgtctacctattggagggatacaaggttctc
tacagggtggcactggctctgctcagcctctacaaagtatctgtttcatctcgagtggcg
gacgtggaggacttcaggacggatatgaaaaggttcgtgcagaatgtagctcgccactgc
acaattgagaagcttctggagagggccttcatgattccaatggccacacgaagagagctc
aacctcttgttcaatgccaacaaggactccctcatgcaaaaaggtgtcagcatccaccag
aagaggcagtcggtcgaaacagtggactttaccaagttcagctccagtgttgtgacagcg
actgagatgagagtcgtctgggcctggatccccgagcgctttgcccttttcagtcccatc
aggctgtttagcacagctgaacacgggagaagtcttgcttctttctactcacatgtggag
ggacacgaaccagtggtcttaatgatcaaaactgtggatgaagaggtctttggtgccttc
ctgtcaactgatatgacagaaagaagaaagcatgactgtcagggacttgcatattttgga
actggggaatgttttgtttttacgctgcgtcccagcatggagcgctaccagcaggccatg
gtcaacattatgaccagaagagctccccctcagcaggttggaatcagcaacggtgcctgc
tccctcgtgcccaatggtggcagctgtcctgtcacctccaccacaaccgccacacctctg
atctgtcctgctgggactccccaggacccaagctacctgacgatccccttcactgcccca
tcagaggaacccacagatgccaaagagccaaagagacaaaagcaaaaagaagcctctatg
tttatagcaggcaatgacagtcagcttattattggtggtgatggaggccatgctgtctgc
ctacaagacctagaaggaggatacacagagtcttgtgacacattcaagagcatcccactc
tgcaagggacctttcaagatccagtccctggaagtgtggggcatccagaactctatttcc
ttttccaactgctttccctctcagtaa
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