Lates calcarifer (barramundi perch): 108875841
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Entry
108875841 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ADP-ribosylation factor-binding protein GGA3a
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108875841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108875841
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Others
GGA
108875841
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Csm1_N
Motif
Other DBs
NCBI-GeneID:
108875841
NCBI-ProteinID:
XP_018520521
UniProt:
A0AAJ7LDD8
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All DBs
Position
LG5:complement(17880905..17891578)
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AA seq
761 aa
AA seq
DB search
MADDGESLESWLNKATNPSNRQEDWEYIMGFCDQINKELEGPQISVRLLAHKIQSPQEWE
AIQALTVLEACMKNCGRRFHNEVGKFRFLNELIKLVSPKYLGDKVSEKVKSKVIEMLYSW
TVSLPEEAKICEAYQMLKSQGIVLADPEIPLDATLIPSPSPRPKNPVFDDEKKSKRLAEL
LKSKKPDDLQEANRLIKNMVKEDEVRTQKATKQKSTLEQVNNNVKLLNEMLAHFNPEDST
DGDKELIRELYGDCDKLRQTVVQLATETEDNDSSLGDILQASDDLSRVINSYKKIVEGQT
INGETEEAQQTQTSVRQGTGRTNQSEILIDLVGLDIQSPSPPDQQPPAPSLSFPADLLCG
SAAAEPQSQSPSAPSAALSLLDEELLSLGLNEPTPVDSSQDLHLFDTTSPTGPTFSSSSL
FPDALPATVAPLNPTKSSTAASALTFPGPVLAPPVFTESIPTTSVIFPQPLSTVLTASAP
SALPQSFTVDLPASSATHVTMSQQVSSPPGAPHSSSTSLSNNLQDLSLLDLGSPKNTHGA
MDFGSLLVKSEDLCTPATLSSSLGVSSTTSTSLLTGGMQGGSALPPAKSQADDSPLLRSL
SPILPLSQANPGMGQEVSLANVFVPLDAIKPSKVSPVTAYDKNGVRVLLHFATDCPPGRP
DVLVIVASTLNTAPLPVRNIVLQAAVPKTMKVRLQPPSGTELAPFNPILPPAAITQVMLL
ANPLKEKVRMRYKLTFTLGEQPLTEVGEVNEFPPADRWGAL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatggagagtcgctggagtcctggctcaacaaggccactaacccttccaac
agacaggaagactgggagtatataatgggattctgtgaccaaatcaataaagagctagaa
ggcccacaaatatccgtcaggctgttggctcacaagattcagtcccctcaggaatgggag
gcgatacaagcattaacggttcttgaggcttgtatgaagaactgtgggcgaaggtttcac
aatgaagttgggaaatttaggtttttaaatgaattgattaagctggtttcacccaaatac
ctaggagataaagtatcagaaaaggtgaagtcgaaagtgatcgagatgctgtacagctgg
actgtgtctctgcccgaagaagcaaagatctgtgaagcatatcagatgctgaagtctcag
ggtattgttttagctgacccagaaatccctcttgatgccacattaataccgtcaccctct
ccgcgacccaagaatcctgtgtttgatgatgagaagaagagtaagagactagcagagctg
ctgaagagcaaaaagcctgatgatctgcaagaggccaatcggctcatcaagaacatggtc
aaggaggatgaagtgagaacacagaaagcaacaaagcaaaaaagcacactggagcaggtc
aacaacaatgtcaaactcctaaacgagatgctcgctcacttcaatccagaagactccacg
gacggagacaaagagctgattagggagttgtatggtgattgtgataagcttaggcaaact
gtggttcagctcgctactgagactgaagacaacgacagcagcttgggagacatcctgcag
gccagtgatgacctctcccgtgttattaactcctataagaagattgtggaaggacagacc
atcaatggagagactgaagaagcacaacaaactcaaacatcagtcagacaaggcaccggc
cgcacaaaccagtcagagattctgattgacctggtgggtctggacatccagagcccctct
ccgccggaccagcagcccccggcaccttctctgtcttttcctgctgacctgctgtgtggg
tcagctgctgctgaacctcagtcccagagccccagtgcaccctctgcagctctctctctg
ctggatgaagagctactatccttaggcctcaatgagcccactcctgttgattccagtcag
gatttgcatctttttgacactacttcgcctacgggtcctacattttcttcatcttcactt
tttccagatgctctgcctgcaacagtagctccacttaaccctaccaagtcttctacagct
gcctctgccttaactttccctggccctgtcttggcacctccggtttttacagaatctatc
ccaacaacatcagtcatattcccacagccccttagtacagtattgaccgcctcggcccca
tctgctcttcctcagtcattcactgtggacttgcctgcttcctcagccacccacgtcacc
atgtcacaacaggtctccagtccacctggagctccgcattcttcctcaacttctctcagt
aacaatctgcaagacctttccttgctggatctgggcagtcctaaaaatacacatggtgca
atggattttggcagcttgttggtcaagagtgaggatctgtgcactcctgctaccctgtcc
tccagccttggcgtctcctctaccacatccacctcactgctcacaggagggatgcaggga
ggctctgctctcccacccgccaagagtcaagcagatgacagtcctctgttacgctctctg
tcccccatcctccctctgagccaggccaacccaggcatgggacaggaagtgtccctggcc
aatgtctttgtccctttggatgccatcaagccaagtaaagtgagtcctgtgacagcatat
gacaaaaacggtgtccgtgttctgctgcattttgccactgattgtccaccaggcaggcct
gatgtactggtgatagtggcatccacgcttaacacagccccactgcctgtcaggaacatt
gttctgcaggcagctgtgcccaagacgatgaaagtaagactgcagccaccctcaggaaca
gagctggctcccttcaaccctatccttccccctgctgccatcactcaggtcatgttgctt
gccaatcctctcaaggagaaggttcggatgagatacaaactgacattcacactgggagag
cagccgctcacagaggtgggggaggtgaatgagttcccgcctgctgacagatggggtgct
ctatag
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