KEGG   Lates calcarifer (barramundi perch): 108876068
Entry
108876068         CDS       T04895                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03020  RNA polymerase
lcf04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108876068
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108876068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108876068
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     108876068
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 108876068
NCBI-ProteinID: XP_018520888
UniProt: A0AAJ7PER2
LinkDB
Position
LG23:6308192..6320819
AA seq 687 aa
MASGDDDDPIIEEIDVYLAKSLADKLYLFQYPVRPSTMTYDDVDHLTAKIKPKQQRVELE
MAINTMSPNYCRSKGEQIALNVDGTAFDETNTYSAKMMDKQTFSSIQATTNTSRYAAAVF
RKGELHVTPLTGILQMRPSFSYLDKADNKTREREAANEGGDSSQDEAEEEAKAITVRFAR
PESEQARQRRIQSYEFLQRKQAEEPWVHLHYHGVKDGRSEHERQYLFCQSVDASENSELV
KTPKEYLAMLMPPLAEEKVVKPVGPSNVLSMAQLRTLPLGEQVKTLMKNVKVMPFANLMG
LLASGTDSTSVLRCIQQVALLVQGNWVVKSDVLYPKNTFSPHSGVPAEVLCRGRDFVMWR
FTLERSVMRKEIASIIKLPPEDVKEFLEHVATPRINRGWEFMLPTDVDFIKKHPDVAHRQ
HMLWLGIQSKLEKVFNFVKEDFMPKNSPQSEPVHVSGEQRLKMAQERAQENQSSLQKDLD
ARRAGSSIHIKQEPLSDKEYEPMDTSSPPCSSSIPNGSVNGYPSATSPGFDHTNGNTPSL
ELQDFVIKTFRKHFVLTLNELKRLFNLHLASMPAGRKVFHSISDHMLQDAMLLCNCKQIM
VPFPAQSTAAPDEQKVFGLWETGEDFDKHRRLLYDVFTKNYRIRRNIIQTRLAQEFGDAS
KADIDRLLKECCISHAGMWYLKGTIQS
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggccagcggggatgatgatgaccccattatagaggagattgatgtgtaccttgccaaa
agccttgcagataaactgtatcttttccagtaccctgtccgaccatccaccatgacctat
gatgatgtcgaccacttaacggctaagatcaaacccaagcagcaaagggtggagctggaa
atggcaatcaacacaatgagtccaaactactgtcgcagtaagggagagcaaatagctctg
aatgtggatggcacagcttttgacgaaaccaacacctactcagcgaaaatgatggacaag
caaaccttctcctccatccaagccaccaccaacacctccagatacgccgctgctgtgttt
cgtaaaggcgagcttcacgtcacacctctgacgggaatcctccagatgagacccagcttc
tcttacctggacaaggctgacaacaaaaccagagagagggaggcagccaatgaaggtgga
gactcctctcaggatgaagctgaggaagaagccaaggccatcacggtgaggtttgctcgt
cctgagtcggagcaagcccgacagaggaggatccaatcctatgagttcctccagaggaag
caggcagaggagccctgggttcacttgcactaccacggtgtcaaggatggtcgctcagag
catgaaaggcagtacctgttctgtcagtcggtggatgcctcagagaactctgaattggtt
aaaactcctaaggagtacctggcgatgctaatgccccctcttgcagaggaaaaagttgtg
aagcctgtcggtcctagtaatgtgctttccatggctcaactccgcactctgccgctggga
gaacaagtcaagaccctgatgaagaatgtcaaggtgatgccatttgctaacctgatgggc
ctcctcgcctctggcacagactccacctcagtcttgcgctgcatccagcaggtggcgctg
ctggttcaggggaactgggttgttaagagtgacgttctgtatcctaaaaacaccttcagt
cctcacagtggtgtccctgctgaagtgctctgtcgtggcagggactttgtgatgtggagg
ttcactctggagcgctctgtgatgagaaaggagattgcatccatcatcaaacttcctccg
gaggatgtgaaggagttcctggagcatgtggcaacacctcggataaaccggggctgggag
ttcatgttgcctactgatgtagacttcattaagaaacacccagatgttgcccacaggcag
catatgctgtggcttggcatccagagcaagttggaaaaggtctttaactttgttaaagaa
gacttcatgccaaagaattcccctcagtctgaacctgtccacgtcagcggagagcagcgt
ctgaagatggctcaggagcgggcgcaagaaaaccagtcgtccctacagaaggacctggac
gccagaagggcaggaagcagcatccacatcaaacaggaacccttaagcgacaaggaatac
gagcccatggacacttcctctcccccttgctcctcttccatccccaatggttctgtaaac
ggttaccctagtgccacctctcctggcttcgatcacactaacggtaacacaccttccctg
gagttgcaggactttgtgataaagactttcaggaagcattttgtactgacgctgaatgag
ttaaagaggctgtttaacctccatttggcttccatgccggcgggacggaaggtcttccat
tccatctcggaccacatgcttcaggacgccatgctgctctgcaactgcaaacagataatg
gtgccttttcctgctcagagcacagcagcccccgatgaacagaaagtgtttggcttgtgg
gaaactggagaggactttgacaagcatcgtcggctgctgtatgacgtgttcaccaagaac
taccggatccggaggaacatcatacaaaccagactggcacaggagtttggagacgcctct
aaagctgacatcgaccggctgctcaaggagtgctgcatcagccatgcagggatgtggtac
ctcaagggaacgatacagtcctga

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