Lates calcarifer (barramundi perch): 108876090
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Entry
108876090 CDS
T04895
Symbol
nectin3a
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108876090 (nectin3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108876090 (nectin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108876090 (nectin3a)
04090 CD molecules [BR:
lcf04090
]
108876090 (nectin3a)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108876090 (nectin3a)
CD molecules [BR:
lcf04090
]
Proteins
108876090 (nectin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C2-set_2
ig
Ig_2
I-set
Keratin_assoc
C1-set
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108876090
NCBI-ProteinID:
XP_018520917
UniProt:
A0A4W6DS65
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All DBs
Position
LG21:16921237..16952068
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AA seq
554 aa
AA seq
DB search
MEKTSPLRGTLSSNGLRLLTSLLTLYGLTTGVSSNHVLVPEKVNAVLGKNITLACKIEMG
SNLSLTQISWERRLPSGTITLAVFHPKYGTSFSPEYTQRISFVSPSIQDATITLREVGFA
DIGSYTCKVATFPLGNTQASTYVNVLVEPKVYVSAGPTALLDGGNESLVATCIAERGRPA
AEVFWETELYGRSEKQSHDEPNSTTTVHVRYMWQPQSYAQGKTLTCVVRHPALQTEFRIP
YILNVQFAPMVSIIGLDKNWYVGQENVKFTCGAKANPPARHFTWIRLDGLMPDGVEISNN
SFAFTRPLERNDSGVYRCEVMNDIGLRSQNVNLWVQDPPPTTAAPSTTASLLRDTSGTGT
AADQQRSPFTSPTLASLPDSSLGTIVGGAVGGVLFLILLLILGGACFMRQRRTFRGDYYT
KQYLGPSDMQKESQLDVLQPHELQEVYGDKTSKGSQELKPKLGGDIIYPDYTPERKDRDD
WADRGDAHRGLKEGNYYPDHYNTQNMHPCGPPVHSPIVNNGSPYLPEDCFDNGTDSDYVS
HMDGSVISRREWYV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacatcaccgctcagagggactttgtcgtccaacggactgcgacttttaaca
tcacttctcaccttatacggacttaccacaggtgtgagcagtaaccatgtgcttgttcct
gagaaagtgaatgcagtgctggggaagaatatcacactggcctgcaaaatagagatgggc
tctaacctcagcctcacacagatctcctgggaacgtcgtcttccttcaggcaccatcaca
ttagcagtgttccacccaaagtatggaacctcgttctctccagaatacacccagcgcatc
tcttttgtttccccttcaatacaagatgctaccattacccttagagaagttggctttgca
gatatcgggtcctacacctgcaaagtggcaacgtttcctctgggcaatacacaagcttca
acctacgtcaacgtattagtggagccaaaggtgtacgtgtccgccggcccaacagctctg
ctggatggcgggaatgagtcgctggtggccacgtgcatagcagagcgtggccgccccgct
gctgaggttttctgggagacggagttgtatgggcgaagtgagaagcagagtcatgatgag
cccaacagcaccaccactgtacatgtgcgctacatgtggcagcctcagagctacgcccag
gggaagacgcttacctgtgtggtgcgccacccggccctgcaaacagagttccgcataccc
tacatactaaatgttcagtttgcaccaatggtatcaataattggactcgacaaaaattgg
tatgtgggtcaagagaatgtgaagtttacctgtggtgccaaagctaacccacctgcccgt
cacttcacatggatcaggttggatggattgatgcctgatggtgttgagatctcaaacaac
agctttgctttcactcgcccgttggagcgcaatgactctggagtatatcgttgtgaagtg
atgaatgacattggtctccgcagtcagaatgtaaacctctgggtacaagatcctcccccc
accactgcagcccccagcaccactgcatccctcctccgtgacacctccggaacgggcact
gctgcggaccagcagagatccccgttcacctccccaaccctggcttccttacctgacagc
agcctgggtactatagttggcggggcagtgggtggagttctgttcttgatcctcttgctg
atcctgggtggggcgtgctttatgcgccagcgcagaaccttcaggggagactactacacc
aaacagtacctgggaccctccgacatgcagaaggagtctcagctcgatgtgctgcagcca
catgagctgcaggaggtctatggggataagacgagcaaaggcagccaggagctaaaaccc
aaactgggtggagacataatttaccccgactacacccctgaacgcaaggacagggatgac
tgggctgacaggggggatgcccacagaggcctcaaggagggaaactactaccccgatcac
tacaacacccaaaacatgcacccctgtgggccccctgtgcacagccccatagtgaacaac
ggctccccctacctcccggaggactgctttgacaatggcacagacagcgactatgtgtcc
cacatggacggatctgtgatctcacgcagggagtggtatgtttga
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