Lates calcarifer (barramundi perch): 108876120
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Entry
108876120 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: high affinity cationic amino acid transporter 1-like
KO
K13863
solute carrier family 7 (cationic amino acid transporter), member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108876120
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC7: Cationic amino acid transporter/glycoprotein-associated
108876120
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GFIT
Motif
Pfam:
AA_permease_2
AA_permease
AA_permease_C
Motif
Other DBs
NCBI-GeneID:
108876120
NCBI-ProteinID:
XP_018520955
UniProt:
A0AAJ7PF70
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Position
LG21:18924316..18937939
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AA seq
647 aa
AA seq
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MILATLKGIGKQLLRVKVVDCNTDESRLCRCLNTFDLVALGVGSTLGAGVYVLAGAVARD
SSGPAIVLSFLIAALASVLAGLCYAEFGARVPKTGSAYLYSYVTVGELWAFITGWNLILS
YIIGTSSVARAWSATFDELIGRHIEEFCRRYMTMNAPGILAEYPDIFAVFIILTLTGLLV
FGVKESALVNKVFTCINVLVLLFVIISGLVKGNLNNWSLNPEEILNATTNSSLNVSDSLP
SEETLGEGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQRAIPIGIVASLLIC
FVAYFGVSAALTVMMPYYMLDKNSPLPVAFKYVGWEGATYAVAIGSLCALSTSLLGSMFP
MPRVIWAMADDGLLFKCLAKISPRTKAPLTATVTSGVVAAVMAFLFDLKDLVDLMSIGTL
LAYTLVAACVLVLRYQPEQPSAAYEMANTQDEAEITESYNEGTLXMLPQPDDHFTIKNLL
FPSNTEPSPLSGFAVNICTSILGVLVCVFSVVAVQGGLAPWSMSILCVIMVVCLILTLIV
CRQPQSKAKLAFKVPLLPFLPIISMFVNVYLMMQLDRGTWLRFSIWMVLGFIIYFGYGIR
NSAEAVLTRSDTYSPACTIKGEPMTTEKEAFLHDGQNATGDDDDEDS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattctggcgacattaaaaggcatcgggaagcagctcctgcgggtgaaggttgtggac
tgcaacacggatgagtcccgcctgtgtcgatgcctcaacacgtttgacctggtggccctg
ggtgtgggcagcactctgggcgctggcgtctatgtgcttgctggcgccgtagcccgagac
agctctggacccgccatcgtcctctccttcctcattgccgccctggcctctgtcctggct
ggtctgtgctatgctgagttcggggcccgtgtccccaaaaccggctcagcttacctctac
agctatgtaacggtcggggaactatgggccttcatcacgggctggaacctcatcctctct
tatattatcggaacctcaagtgtggcccgagcatggagtgcaacctttgatgagctgatt
ggaaggcacattgaggaattctgcagacgctacatgaccatgaatgccccgggtatcctg
gcagaatatccagacatatttgctgtcttcatcatactcactctgacaggactgcttgta
tttggagtgaaggagtcagccttggtaaataaagtattcacctgcatcaatgtactggtg
ctgctgtttgtgatcatctctggcttggtcaaaggaaaccttaacaactggagcttgaac
cctgaagaaatcctcaacgccaccaccaactccagccttaatgtgtctgactccttgcca
tcagaggaaactcttggtgaaggtggtttcatgccttttggcttttctggagtcctctct
ggtgctgccacctgcttttatgcctttgtcgggtttgactgcattgccaccacaggagaa
gaagtgaagaatccccagagggccatccctattgggattgtggcctcgctcctgatctgc
tttgtggcgtacttcggtgtgtccgcagccctcactgtgatgatgccttactacatgcta
gacaagaacagccctctgccagtggcctttaagtatgtgggctgggagggagccacttat
gcagtggccattggctctttatgtgccttgtcgaccagtttactaggctccatgttccca
atgcccagagtgatctgggccatggcagatgatggcctgctcttcaaatgcttggctaaa
atcagcccacgaaccaaagcccctctaacagctacagtaacatcaggtgttgtggcagct
gtgatggctttcctgtttgacttgaaggacctggttgacctcatgtccattggcactttg
ctggcctatactctggttgctgcctgtgtgctagtcctcaggtaccagccagaacagcca
agtgcagcctacgagatggccaacactcaggacgaagctgagattacggagtcttataat
gagggaacactgnacatgttaccacagccagatgatcacttcaccatcaagaatctcctc
ttcccttcaaacacggagccatccccgctgtccggctttgctgttaacatttgcaccagt
atacttggcgttttggtgtgtgtcttcagtgttgtagctgtacaaggagggctggcaccc
tggtcaatgtccatcctttgtgttatcatggtggtttgtctgattctcaccctcattgtg
tgcagacagccacagagcaaagcaaagcttgccttcaaggttcccctgctgccctttctc
ccaatcattagtatgtttgttaacgtgtacctgatgatgcagctcgacagaggaacctgg
ctgcgcttttccatctggatggtcttaggtttcattatctactttggctatggcattcga
aacagtgcagaggcagtgttgaccaggtctgacacctactcaccagcctgcacaataaaa
ggagaacccatgaccacggagaaggaagccttcctacatgacgggcaaaatgccaccgga
gatgacgacgacgaagattcctga
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