Lates calcarifer (barramundi perch): 108876170
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Entry
108876170 CDS
T04895
Name
(RefSeq) progesterone receptor isoform X1
KO
K08556
progesterone receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04114
Oocyte meiosis
lcf04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108876170
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108876170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876170
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108876170
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108876170
Nuclear receptors [BR:
lcf03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
108876170
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108876170
NCBI-ProteinID:
XP_018521030
UniProt:
A0A4W6CFW8
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Position
LG21:19612658..19619920
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AA seq
676 aa
AA seq
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MENKINGRMSTISTPTADSTDTRVSDLIEAGFSKTKLPDDSQSLTCMSSSVRNFGHTGTL
IHGMHPSGDGSVFKDCNILDSPLATKHFYDRSNEYLKCDSVPWEDFVKVQRTNVATSESL
PGASVSLSSTTGACKFIKDEKQPSVIMDTPCPNFDPSSEMSALDTCCDTERKQQLGLGDG
ESTSFRAATAGTRPGLEGSPNFLIDLNQTEQLPALSQVRTDSRCSLSGKAVVNFDAHPHA
ASQQTVYKNEIPRWQMQTSLAEPQYWCQSAGVTEDPFAHSGYEVIQNQALSQRNPSPFSA
YPGMPPQRLCVICGDEASGCHYGVLTCGSCKVFFKRAVEGHHSYLCAGRNDCIVDKIRRK
NCPACRLRKCYQAGMMLGGRKLKRFGALKALGLASSLMFQSHLAMSNDSQALTSMSCIPG
IREVQLTQQIISILENIEPEVVYSGYDNSQPEAPHLLLTSLNRLCEKQLLWIVKWSKSLP
GFRNLHITDQMTLIQYSWMNLMVFSLGWRSFQNVTSEYLYFAPDLVLSQEQMMRSPIYDL
CLAIQFIPQEFANLQVTREEFLCMKAIILLNTVPLEGLKSQAAFEEMRQNYIRELTKAIH
MKEKGMVASSQRFYHLTKLMDAMHDIVKKVNLFCLSTFIQADAMKVEFPEMMSEVIASQL
PKVLAGMVRPLLFHTK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaataaacggacggatgagcactatcagtactccgaccgctgattctacc
gacacaagagtaagtgacttgattgaagctgggttcagtaaaactaaattacctgacgac
tcacagtccctaacttgcatgtcctcctccgtgcgtaattttggacacactggcacactg
atccacggtatgcatccaagcggcgacggctcagttttcaaggactgtaacatactcgac
agtccacttgccacaaaacacttctatgaccgtagcaatgaatatctgaagtgtgacagt
gtgccgtgggaagattttgtaaaagttcagagaacgaatgtggccacatccgaaagtttg
ccaggcgcaagcgtgagcctctcctcgacaaccggagcctgcaagttcatcaaagacgaa
aagcagccttctgtgatcatggacaccccttgtcccaactttgatccatcatcggagatg
tctgccctcgacacctgctgtgacaccgaaaggaagcagcagctggggcttggagacggg
gagtcgacaagcttcagagcagccacggcgggtactcggccggggctggagggatctcca
aactttctgattgacctgaaccagacagagcagctgccggcgctgagccaggtgaggact
gactccaggtgtagtttgtccgggaaggctgtcgtcaacttcgatgctcaccctcacgca
gcctcgcagcagaccgtgtacaagaacgagattccccgttggcagatgcagacgtccctg
gctgagcctcagtactggtgccagtccgcaggggtgaccgaggacccgttcgcccacagc
ggctatgaggtgatccagaatcaggccctgtctcagaggaacccttcacctttctctgca
taccccgggatgccacctcagagactgtgtgtgatctgtggtgatgaggcatctggttgc
cactatggagtcttgacctgtgggagttgtaaagtcttttttaaaagagcagttgaaggc
catcatagttatctctgcgctggacgaaatgactgcattgtggacaaaatccggaggaaa
aattgccctgcatgtcgcctccgaaagtgctatcaagctgggatgatgcttggaggcagg
aagttgaagcgttttggggccttgaaagccttgggtctggcatcatccctgatgttccag
tcccacttggccatgtccaacgacagtcaggccctgacctccatgtcttgcataccaggc
atccgtgaggtgcagctcacccaacagatcatcagcatcctggaaaacattgaaccagag
gtcgtgtactctggttacgacaactcccaacccgaagcaccccatcttctactcaccagt
ctcaacaggctgtgtgagaagcaactgctgtggattgtcaagtggtccaagtctttgcca
ggctttcgtaatcttcacatcactgatcagatgaccctcatccagtactcgtggatgaac
cttatggtgttctcgcttgggtggcgctcctttcagaacgtcaccagtgaatatttatat
ttcgcacccgacctggttcttagtcaggagcaaatgatgagatctccaatttacgacctc
tgtctggcaatacagtttattcctcaggaatttgcaaatcttcaagttacccgtgaggag
tttctgtgcatgaaagccataatactactcaacacagtgcctcttgagggactgaaaagt
caggcagcatttgaagagatgagacaaaactacatccgggagctgaccaaggctatccat
atgaaggagaagggcatggtggccagctcgcagcgattctaccacctcaccaaactgatg
gatgccatgcatgatatagtgaagaaggtcaacctgttctgcctgagcaccttcatccag
gcagatgccatgaaagtggagtttccagagatgatgtcagaggtcattgcctcccagctt
cccaaggtcctggcaggcatggtgaggccactcttattccacaccaagtga
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