Lates calcarifer (barramundi perch): 108876223
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Entry
108876223 CDS
T04895
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876223
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108876223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_2
SET
zf-Di19
Zn_ribbon_PRDM4
zf-C2H2_6
Zf-C2H2_ZNF451
zf-met
zf-C2H2_STOP2_C
DUF629
zf-C2H2_7th_ZNF462
TerY_C
Motif
Other DBs
NCBI-GeneID:
108876223
NCBI-ProteinID:
XP_018521106
UniProt:
A0A4W6CER6
LinkDB
All DBs
Position
LG21:complement(20370145..20380928)
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AA seq
1168 aa
AA seq
DB search
METKQEPSAVWSQTANSDSSNTTQVHFEGSTVAQIVYSGDQADRGQQQVVYTADGNSYAS
VESAEHTLVYIHPADGSQTVFADQPQVAYIQQDGTTQQVTVLLPSGQNMNAANLHVLSNV
AEAPQAILEPVSQEQLSNSLTSMADIADPPTSPLGATDSTDDSDEDEDDDSEMDDWEPRQ
PQSFNPHSLWCEECNNANPSICLKHGPLHPIPNRPVMSKARASLPLVLYIDRFLGGVFSK
RRIPKRTQFGPVEGPLVPQSELQDHYIHLKLCLLDAEKDGEKSNDMWLDLSDEDNCNWMM
FVRPAQNHLEQNLVAYQYGSEIFYTTIKNIQPKQELKVWYAASYAEFVNQKIHDVTEEER
KVLREQEKNWPCYECNRRFVSSEQLQQHLNMHDDKLNSVSRSRGRGRGRGRKRFGSGRRP
GRPPKFIRLDPPVDGGGDKTTEMLELTEKQSLDERVEGAQNGLKVVEMEPEAEAGTELEG
QLIPPAGEPVPESVTPPSNTDLTVPLKEDPAQSSQSEAHLTSQDMRRAKRIRNAALQHLF
IRKSFRPFKCTHCGKAFRDKDKLDQHLRVHGRDAYAFSCHICSKSFMSDSALEDHLLVHT
ENRSYSCLLCPETFERLDLLKDHVGVHAVNGCYACPSCKKTFTDFIQVKKHIRCFHSEKI
FQCPDCEKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPDREAKK
ADRIHRSKTLKLKVPTTDFESFMFKCRVCMMGFRRRGMLVNHLSKRHPEMRIDDVPELTL
PIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAAPGEPDPMLSTHT
QLTGTIATAPVCCPHCAKQYSSKTKMVQHIRKKHPEFAQLANTIQAPLTTAVISSAPAVI
SADGTTAEAVVTTDLLTQAMTELSQTLTTDYRTAQGDYQRIQYIPVSQAGGSLSQPQHIQ
LQVVQVAPASSPHSQHPTVDVSQLHDPHGYSQHSIQVQHIQVTEPSGTGQGGTQVTGQPL
SPTSQQASQELSPAQLTPVTLAQSHTLQTSSTQQQQGTVQHAYIPGNWNYRGYSSEIQMM
TLPHTQYVIAEASTPVSGVNSNQVKTTHYVISEGQTELETKQTVPQSTTQAHTEHLEQQP
TNQQATTQYIITTTTNGSGTSEVHITKP
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagcaggagccctccgctgtgtggagtcagacagctaacagtgattcaagc
aacaccacacaggtacattttgaaggcagcacagtggcccagatagtgtacagtggcgat
caggcggaccggggacagcagcaggtggtttatacagcagacgggaactcctatgcctct
gtagagtctgcagagcacacactggtctacatacacccagcagatggctctcagactgtt
tttgctgatcagccacaagtggcttacattcaacaggatggtacaactcagcaggtcaca
gttttgctgcccagtggacagaacatgaatgctgccaatctgcacgttctcagtaatgta
gcagaggctccacaagctatcctggagccagtttcccaggagcagctgtccaattcgctc
acgtccatggcggacatcgcagaccctcccaccagccccctcggggccacagactctaca
gacgattctgacgaagatgaagatgacgactctgagatggatgactgggagcctcgtcag
cctcagtcattcaaccctcacagcctctggtgcgaggagtgcaataatgccaatccctca
atctgtctgaagcatggtcctctgcaccccatccccaaccggccagtgatgtccaaagcc
agggccagtctgcctctggtcctctacatcgaccgcttcctgggcggggtgttctccaag
agacgcatcccaaaacgcactcagtttggtcctgtggagggacccctggttcctcagagc
gaactacaagaccactacattcatctcaaactgtgtctgctggatgcagagaaagatgga
gagaagtccaatgacatgtggttggacctctctgacgaggacaactgtaactggatgatg
tttgtgaggcctgctcaaaaccacctggagcagaacctggtggcctatcagtacggctca
gagatattttatactaccatcaagaacatccagcctaaacaagagctcaaggtgtggtac
gcagcatcatatgcagagtttgtaaatcaaaagatccacgatgttacagaagaagagaga
aaagtgctgcgggagcaagagaagaactggccttgttatgagtgtaaccgtcgctttgtg
agctctgaacaactgcagcaacatctcaacatgcatgacgacaagttaaactctgtttct
cgatccagaggccggggtcgaggaagaggcaggaagagatttggatctggaagaagacca
gggcgaccccctaaatttatacgtttagatccaccagtagatggtggaggagacaagaca
acagagatgctggaactgacggagaagcagtccctggatgagcgagtggagggagctcag
aatggactgaaggtggtggagatggagccagaggcggaggctgggacggagttggagggt
cagcttatacctcctgcaggggaaccggtcccagagtctgtcaccccaccctccaacacg
gacctgacagttccacttaaggaggacccggcacagagcagccaatcggaggcccacctc
acatctcaggacatgcgccgtgccaagaggatacggaatgcagcactgcagcaccttttc
atcaggaagagtttccgtccttttaaatgcactcactgtggcaaggccttccgggacaaa
gacaaactggatcagcatttgcgagtccacggccgggacgcctacgccttttcctgccac
atttgcagcaagagcttcatgagtgactcggccctggaggaccatctcctagtgcacaca
gagaaccgctcctactcttgtctcttatgcccagaaacctttgaaaggctggacctgctc
aaagaccacgtaggagtgcatgctgtgaacggctgctacgcctgtccctcttgcaagaag
acctttactgacttcatccaggtgaagaagcatatacgttgcttccattcagagaagatc
ttccagtgcccagactgcgaaaaggccttctgccggccggacaagctgcgtttgcacatg
ttacgccactctgaccgcaaggacttcctgtgctccacgtgtggcaaacaattcaagagg
aaagataagctgcgggagcacatgcagcgcatgcacaatcctgacagagaagctaagaag
gctgaccgcatccaccgctccaaaaccctcaaactgaaggtgcccaccactgactttgag
agcttcatgttcaaatgcagagtgtgtatgatgggattcagacgcagaggaatgctggtt
aatcatctgtccaagcgtcatcctgagatgcgtattgatgatgtgcctgagctaacgctg
ccaattatcaagcccaacagggactacttctgccagtattgtgacaaggtgtataagagt
gccagtaagaggaaagcccacattttgaagaaccacccgggggcagagttgcctcccagc
atccgtaagttgcgaccagctgctcctggtgaaccggatcccatgctcagcacgcacacc
cagctgactggcaccatcgccactgcaccggtctgctgcccacactgcgctaaacagtac
agcagcaagaccaagatggttcagcacatcaggaagaagcatccagagtttgcccagctt
gccaacaccatccaggctcctttgacaacagctgtaatcagtagtgcccctgcagtcatc
agtgcagatggtaccacagctgaggctgtagtgaccacagacctgctgacacaggccatg
acagagctttctcaaacactgaccacggactatcgaacagcgcagggagactaccagagg
attcagtacatccctgtctctcaggcaggaggcagcctgtcccagccgcagcacattcag
ctgcaggtggtgcaagtggctccggcttcctccccacattcacagcacccgacagtagat
gtgagtcagctgcacgaccctcacggctacagtcagcactccatccaggtgcaacacatc
caggtcacagagccctcaggcactggacaaggaggcacccaggtgactggtcagcctcta
agccccacctcccagcaggctagtcaggagctgagccccgcccagctgacccccgtcacc
ctggctcagagccacaccctgcagaccagcagcacccagcagcaacaggggactgtgcag
catgcttacatacctgggaactggaactaccgaggttattcgtctgagatccagatgatg
actctacctcatactcagtatgtgatagctgaggctagcacacctgtatctggagtcaac
agcaaccaggtgaaaacgacacactacgttatctccgagggtcagactgagctggagaca
aaacagactgttcctcagagcacaacccaggcccacactgaacatctggagcagcaacca
actaatcagcaagctaccacgcagtacatcatcaccacaacaaccaatggcagtggcact
agtgaagttcacatcacaaaaccctga
DBGET
integrated database retrieval system
