Lates calcarifer (barramundi perch): 108876261
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Entry
108876261 CDS
T04895
Symbol
fzd1
Name
(RefSeq) frizzled-1
KO
K02432
frizzled 1/7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108876261 (fzd1)
04150 mTOR signaling pathway
108876261 (fzd1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108876261 (fzd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108876261 (fzd1)
G protein-coupled receptors [BR:
lcf04030
]
Frizzled / Smoothened family
108876261 (fzd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
108876261
NCBI-ProteinID:
XP_018521153
UniProt:
A0AAJ7LGH0
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Position
LG15:complement(16177916..16182697)
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AA seq
553 aa
AA seq
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MVYNRLLRTVLPLLFFILFINVGIFRVNGQYGGGDRGMSIPEHGFCQPISIPLCTDIAYN
ETIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPDLKFFLCSMYAPVCTVLEQALPPCRSL
CERARQGCEALMNKFGFQWPDSLACESFPVHGAGELCVGQNMSDRTDSESPGPYPTERTP
SGPVNGQFRCPASLRVPPYLNYRFLGQENCGAPCEPKRSHGMMYFSEEELKFARIWIGIW
SVLCCASTLFTVLTYLVDMKRFSYPERPIVFLSGCYTMVSIAYIAGFLLEDKVVCNDRFD
NDIRTVVQGTKKEGCTILFMMLYFFSMASSIWWVILALTWFLAAGMKWGHEAIEANSQYF
HLAAWAVPAIKTITILAVGQVDGDVLSGVCFVGINSVDALRGFVLAPLFVYLFIGTSFLL
AGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGIFSVLYTVPATIVIACYFYEQAFREQWER
TWISQTCKTYAVPCPIQNHPNMSPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRRFY
TRLANSKQGETTV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtttacaacagactcctccgtacggttttgcccttgctgttttttattctgttcata
aacgtgggaatctttcgagtaaacgggcagtacggcggcggtgaccgaggaatgtctata
ccggagcacgggttttgccagccgatctccattccgctgtgtacggacatcgcgtacaac
gaaactatcatgccaaacctgctgggtcacaccaaccaggaggacgcggggctggaggtc
caccagttctacccgctggtgaaagtgcagtgctccccggatttaaagttcttcctctgc
tccatgtatgcgcccgtgtgcacggtgctcgagcaggcgctgcctccgtgccgctctctg
tgcgagcgcgcgcggcagggttgcgaggcgctcatgaacaagttcggcttccagtggccc
gatagcctcgcgtgcgagtccttcccagtccacggcgcgggagagctgtgcgtcggccaa
aacatgtcggaccgcaccgactcggagagccccggtccgtaccccaccgagcgcacaccc
tctggccccgtgaacggtcagttcaggtgcccggcctcgctcagggtgcctccctatctg
aactaccgcttcctcgggcaggagaactgcggcgctccctgtgagcctaagagatctcac
gggatgatgtactttagtgaggaggagctcaaatttgcgaggatatggatcggcatctgg
tcagtattgtgctgtgcttccactttatttaccgtactgacctacctggtggacatgaag
cgcttcagctacccggagcggccaattgtcttcctctctggctgctacactatggtatcc
atcgcctacattgctggatttttactggaggacaaggtggtgtgcaatgacaggtttgat
aatgacataaggactgtggtgcagggcactaaaaaagagggctgcaccatcctcttcatg
atgctgtacttcttcagcatggccagctcaatctggtgggtcatcctggccctcacctgg
ttcctggcagcagggatgaaatggggccacgaggccatcgaggctaactctcagtacttc
cacctggcagcctgggccgtgccggccatcaagactattaccatcctggctgttgggcag
gtggacggagatgtgttgagtggggtttgcttcgtgggtatcaacagcgtggacgccttg
cgtggcttcgttctggcaccgttatttgtctacctgttcatcggcacctccttcctcctg
gctggcttcgtgtccctgtttcgcatccggaccatcatgaagcacgacggcaccaaaacg
gagaagctggagaagctgatggtgcggatagggatcttcagcgtgctgtacactgtgccg
gccaccatcgtcatcgcctgctacttctacgagcaggccttcagagagcagtgggagagg
acgtggatcagccagacatgcaagacatacgctgtaccatgtcctatccagaaccacccc
aacatgagccctgacttcactgtcttcatgataaagtatctcatgacgctcattgtgggc
attacctctggattttggatctggtctgggaagacactcaactcctggaggaggttttac
acaagactggccaacagtaaacagggtgagaccacagtgtaa
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