Lates calcarifer (barramundi perch): 108876266
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Entry
108876266 CDS
T04895
Name
(RefSeq) matrilin-2
KO
K19467
matrilin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108876266
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108876266
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
VWA_2
EGF_CA
Matrilin_ccoil
hEGF
Plasmod_Pvs28
EGF_3
Sec23_trunk
EGF
DUF4215
SCAPER_N
Motif
Other DBs
NCBI-GeneID:
108876266
NCBI-ProteinID:
XP_018521165
UniProt:
A0AAJ7LE83
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Position
LG15:14465175..14475571
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AA seq
725 aa
AA seq
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MSPLIRMRFLAFGLFCLLCCNAVRLDRRHPRPIAARGQNETVVQTKAMESPCKAIPLDFV
FVIDSSRSIRPNDYEKVKTFIINLLQFLKVGPNATRVGLLQYGSVVQPEFSLKTYTSKAQ
VEQAVRNMEHLATGTMTGLAIQYTMETAFTEEEGARPANLHIPRIAMIVTDGRPQDTVEE
IAAQARQAGIQIFAIGVGRVDMNTLRAIGSEPHSEHVHLVANFSQIETLISGFQSKLCGV
SEMCEVVDHQCQHICVSSPASYRCKCRRGFILNPDGKTCKAEDMCAVVDHGCEHICANLP
DGYECRCRPGYKLNKDLKTCNKIDYCADGTHGCEQEFMNTEGSCVCKCRKGYTLRPDGKT
CKKIDHCADGSHGCEQEFINTENSCMCKCRQGYTLRPDGKTCKKIDHCADGKHGCEQDYM
STEDSCVCKCRKGYTLQLDGKTCQSLDLCQTVDHGCEHQCVSTTDSYICKCFEGFTLAED
GKSCKKPECSDGVMDLVFVIDGSKSLGPANFELVKQFVNGIVDSLDISKTGTHVGLLQYS
TKVRTEFTLSQYTAAQDIKQAVTRMQYMGRGSMTGSALRHMFEFSFSAKEGARPNIPRVS
IVFTDGRSQDDVSEWANKAKNSGVTIYALGVGKAIEQELREIASEPDEKHLYYAEDFEKM
GEITKKLKSRICKDKPSDVNMCQCENVIMFQNQVTEKLKNLVQNIEVMSKKLKTLESQTC
AQIKG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctcttatcagaatgaggttcctggcctttggcctcttctgcctgttgtgctgt
aatgcagttcggctggacagacgccatcccagacctattgcagccagaggtcaaaatgag
actgttgtccaaaccaaagcaatggagagcccttgcaaagccatcccgctggattttgtc
tttgtcatcgacagctctagaagcatccgtcctaatgactacgagaaggtcaagaccttc
attatcaacctgcttcagttcctcaaggttggccccaatgccacaagggttggtctactc
cagtatggcagtgtggtccagcctgagttctccctcaagacctacaccagtaaggctcag
gtggagcaggcggtgaggaacatggagcacctcgccacagggaccatgacaggtctggcc
atccaatacaccatggagactgccttcacagaggaagagggggcacgaccggccaacttg
cacatcccacgaattgctatgattgtgaccgatgggaggcctcaggatacagtggaggag
attgcagctcaggccagacaggctggcatccagatctttgctattggagtgggcagggtg
gacatgaacaccctgagggccatagggagtgagccacactcggagcatgtgcacctggtg
gccaattttagccagatagaaaccctcatctctgggttccagtccaaactgtgtggagtg
tcagagatgtgtgaggttgtggaccatcagtgccaacacatctgtgtgagcagtcctgcc
tcgtacaggtgcaagtgcaggagaggcttcatcctaaatcctgatggcaagacctgtaaa
gctgaggatatgtgcgctgtggtggatcatggctgtgaacacatctgtgccaacctgcct
gatggctacgagtgtcgctgcaggccaggatataaactcaacaaagacctgaagacatgc
aacaagattgattactgtgctgatggcacgcatgggtgtgaacaggagtttatgaatacc
gaaggctcttgtgtgtgtaaatgcagaaaaggctacaccctcagacccgatgggaaaacc
tgcaagaagatcgatcactgtgctgatggcagtcatgggtgtgagcaggagtttataaat
acagaaaactcctgcatgtgtaaatgcagacaaggctacacactcaggcctgatgggaag
acatgcaagaagattgatcactgtgctgatgggaaacatggctgtgaacaggactatatg
agcacagaagattcatgtgtgtgtaaatgcagaaaaggatacacactccaacttgatggc
aaaacatgtcagagtctggatctatgtcagacagtggaccatggttgtgagcatcagtgt
gtcagcaccactgactcctacatctgcaaatgttttgaaggatttacgttggctgaagat
ggcaagagctgcaaaaaaccagagtgtagtgatggagtaatggatctggtttttgtgatt
gatggctctaagagtctgggccctgccaactttgagctggtcaaacagtttgtaaatggc
attgtggattcactggacatttccaagacaggcacacatgttggccttcttcagtactcc
accaaggtccgcacagagttcaccctgagccagtacaccgcggcacaggacatcaaacag
gccgtgacccggatgcagtacatggggagaggttctatgactggctcagccttacgtcac
atgtttgaatttagcttttcagccaaagaaggtgccaggccgaacatcccacgtgtcagt
attgtttttactgatggaagatcacaggatgatgtttctgaatgggctaataaagcaaag
aactctggagtcaccatatatgccttgggggttggcaaagccattgaacaggagctgaga
gaaatagcctcagagcctgatgagaaacacctttattatgctgaggattttgaaaaaatg
ggagaaattacaaagaagctcaagtccaggatatgtaaagacaaaccatctgatgtaaac
atgtgccagtgtgagaacgtgataatgtttcaaaaccaggtcacggagaagctgaagaac
ctggtgcagaatatcgaagtcatgtcaaagaagctgaagacacttgagagtcaaacttgt
gcacaaataaaaggctga
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