Lates calcarifer (barramundi perch): 108876316
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Entry
108876316 CDS
T04895
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108876316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108876316
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Serotonin (5-HT3)
108876316
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MamF_MmsF
Motif
Other DBs
NCBI-GeneID:
108876316
NCBI-ProteinID:
XP_050922496
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Position
LG23:complement(6090583..6096265)
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AA seq
449 aa
AA seq
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MFSAVESSETVCSYQDVLNYLNLTKSNELYSMTRPVKDYKQPTTVSLHVLLYAILDVREI
DQTFIPYVWIFMSWQNQYISWNPSDFCGISGVSLPTEVLWKPDLTIEEMTEKDKAPPSPH
LTIFSTGVILIQNDQVLVSTCRMHVYKFPFDTQTCTLTFKSVIHSVDEIQLVHDTNSSQA
TEWSREVMRTQYEWLFIDMTVSNQTVTKFGLEQDVIMYTISMKRRSVLYIVNFILPVLFF
LGLDLASFLISDNGGEKLGFQVTVLLAVTVMQLILNEILPSSSNRIPLIAVYCIGIFSLM
MLSLLETILVLYLIEKDNEADEDQRLCEDCGGKQSKTSFQNNREEKKWNQCACVCDVSPD
ETPTEPLKFQVSSSQVTEESQGFEKLSDVLREVVKTLTLLHNSRNEGGKHGYWTRKTKTI
NKVFFIFYIISASLFLFCMFFNWSYAEEL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagctgtggagtcctctgagactgtgtgtagttatcaggatgttttaaactac
ctcaacttaaccaaaagcaatgaactgtactcaatgacacggccagttaaagactacaaa
cagcccacaacggtctctctgcatgttctgctttatgccattctagatgtgagagagatc
gaccagacattcattccttacgtttggattttcatgtcctggcagaaccagtacatctca
tggaatcctagtgacttctgtggtatcagcggagtttctcttcccactgaagttttgtgg
aagccagatctcactattgaagagatgacagaaaaggacaaagcccctccaagtcctcat
ctcaccatcttcagcaccggtgtcatccttattcagaatgaccaggtgctcgtcagcacc
tgcaggatgcacgtttacaaattccccttcgacactcagacctgcaccctcaccttcaag
tctgtcatacactcagttgatgaaatacagcttgttcacgacaccaactcttcacaggcc
actgagtggtctcgcgaggtgatgcgaacccagtacgagtggctgttcattgacatgaca
gtctccaaccaaactgtcaccaagtttggcttggaacaagatgtgataatgtacactatc
agcatgaagaggaggtcagtcctctacatcgtcaacttcatattacctgtcttgtttttc
ttgggtctggatttggcctccttcttgatctcagacaacgggggcgaaaagctgggcttc
caggtcactgtgctgctcgctgtcactgtgatgcagcttattctgaatgaaatcctgccg
tcctcgtcaaacaggatcccacttatagcggtctactgcattgggattttttctttgatg
atgctcagcctcttggaaacgattctggtgctgtatctgatagagaaagacaatgaggcc
gatgaggaccaacgcctgtgtgaggactgtgggggaaaacaaagcaaaaccagcttccaa
aacaatagagaggagaagaagtggaatcagtgtgcatgtgtctgtgatgtgtctcctgat
gaaacgccaactgaaccgctgaagtttcaggttagcagcagccaagtgacagaggagtct
cagggctttgaaaagctctcagatgttctgagggaggtggtgaaaacactgactctgctc
cacaacagcaggaacgagggaggaaagcacggttactggaccagaaaaactaaaacaatc
aacaaagttttcttcattttttacatcatatctgccagtctgtttctattctgtatgttc
ttcaactggagctatgcagaggaattatag
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