Lates calcarifer (barramundi perch): 108876319
Help
Entry
108876319 CDS
T04895
Name
(RefSeq) acidic amino acid decarboxylase GADL1 isoform X1
KO
K18966
sulfinoalanine decarboxylase / aspartate 1-decarboxylase [EC:
4.1.1.29
4.1.1.11
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00410
beta-Alanine metabolism
lcf00430
Taurine and hypotaurine metabolism
lcf00770
Pantothenate and CoA biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108876319
00430 Taurine and hypotaurine metabolism
108876319
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
108876319
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
108876319
4.1.1.29 sulfinoalanine decarboxylase
108876319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_1_2
OKR_DC_1
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
SepSecS
AcylCoA_DH_N
I-HmuI_NUMOD-like
Motif
Other DBs
NCBI-GeneID:
108876319
NCBI-ProteinID:
XP_018521283
UniProt:
A0AAJ7LGE9
LinkDB
All DBs
Position
LG15:15635078..15642733
Genome browser
AA seq
520 aa
AA seq
DB search
MGIHLKDGNPSESQSPAADPEDPQKCPPVVTDIGALNCSSLNVESFIEQSIAIIMEDVVK
KATDVTEKVCEWRSPEQLKELLDLELTDGGESESKILQHCRDAIRYSIKTTHPRFFNQLY
AGMEPYSMVASFITEALKPSLYTYEVAPVFTLIEDAVLRKMMEMIGWEEGGDGIFNAGGS
MSNMYAVNLARYHHYPHIKELGLSAAPRLVIFTSRECHYSISKAAALLGVGTKNVYVVPS
DNRGKMISSALEEQIKTAKSEGAVPFMVNATAGTTVLGAFDPIEEIADICEKYNLWLHVD
ACWGGAALMSQKHKHLLKGIHRANSVAWNPHKMLMACLQCSAFLVRDKTHLLQRCHSAQA
SYLFQQDKFYDVSYDTGDKSVQCSRKPDAFKFWLMWKALGTRELEQRVDRALAMARYLAQ
EVEKREGFRLLMDPEYANVCFWYIPPSLRNLSDGPEFWKKLHTVAPVIKERMMKKGSMMV
GYQPHGDKANFFRMIIISPQVSKQDMDFVLDEIHNLGKDL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggggatacatttgaaagacggtaatcccagtgaaagccagagccctgctgcagatcca
gaggatccacagaaatgtcctccagttgtcacagacattggtgccttgaattgctcctct
ctgaatgttgagagctttattgagcaatctattgctatcattatggaagacgtggtgaaa
aaggccactgatgtcacagaaaaggtttgtgagtggcgatcccccgagcagctgaaggag
ctgttggaccttgagttgacagatggaggagagtcagagtccaagatcctgcagcactgc
agagatgccatcagatacagcatcaagaccacccatcctcgtttcttcaaccagctgtat
gctgggatggagccctattccatggtggcaagcttcatcacagaggccctcaaacccagt
ctgtacacatatgaggtggctccagtctttaccctgatagaggacgctgtgctgagaaag
atgatggagatgatcggctgggaggaaggaggagatggaatcttcaatgcaggtggctca
atgtccaacatgtatgctgtgaacttagccaggtaccatcactatccacacattaaagag
cttggcctctctgctgctccacgactggtcatcttcacttcacgtgagtgtcattactcg
atttccaaagcagcagctttactgggtgttggcaccaagaatgtttatgtagtgccatct
gacaacagagggaagatgatttcctcagctctggaggagcaaataaagaccgctaaaagt
gagggtgcagttcccttcatggtaaatgccacagcagggaccacagtgctcggagctttt
gatcccatcgaggagatcgcagacatctgtgagaagtacaacctgtggctacatgtggat
gcatgctggggaggagcagctctgatgtctcagaaacataaacacttgttaaaaggcatc
cacagagccaactctgtggcctggaaccctcacaagatgttgatggcatgcctgcagtgc
tctgctttcctggtcagagacaaaacacatctcctccagcgctgccactctgcccaggcc
tcctacctcttccagcaggataagttctatgatgtcagctacgacacgggagacaagtct
gtccagtgcagcaggaagcccgatgcattcaagttctggctcatgtggaaggctttggga
accagagagctggaacagagggtggacagagcccttgccatggccagatatctggcacaa
gaggtcgagaaaagagagggtttccgtctgttgatggatcctgaatatgcaaatgtttgc
ttctggtacattccaccaagtctgaggaacctttcagatgggcctgagttctggaaaaag
cttcacactgtggcccccgttataaaggagcgcatgatgaagaagggcagtatgatggtg
ggctaccagccgcatggagacaaggccaactttttcaggatgattatcatcagtcctcag
gtcagcaaacaagacatggactttgttctggatgagatacacaacctgggaaaggatttg
tga
DBGET
integrated database retrieval system
