Lates calcarifer (barramundi perch): 108876425
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Entry
108876425 CDS
T04895
Symbol
nfyal
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear transcription factor Y, alpha, like
KO
K08064
nuclear transcription factor Y, alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876425 (nfyal)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
108876425 (nfyal)
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
108876425
NCBI-ProteinID:
XP_018521433
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Position
LG6:12118796..12124488
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AA seq
350 aa
AA seq
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MEQYTTATTTTGEQIVVQTANGQIQQQTQGTVTAVQLQTEAPVVTASGQQVQTLQVVQGQ
PLMVQVSGGQLITSSGQPIMVQAMSGGQGQTIMQVPVSGAQGLQQIQLVQPGQIQLQGGQ
TLQLQGQQGQPQQIIIQQPQTAITAGQNQGQQISVQGQQVAQTADGQTIVYQPVNADGTV
LQQGMITIPAASLAGAQIVQAGGANTNTTNSGQGTVTVTLPVSGNMVNAGGMVMMVPGGG
GVPTMQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRH
RHAMQRKRGDGGRFFSPKDKEEMALALSQQQQDVAQAAADETVAQMIRVS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtacaccactgccaccactactactggggagcagatagttgtgcagactgcc
aatggacagatccagcagcagacacagggcacagtgacggctgtgcagctgcaaacagag
gcgccagtggtgacggcctcaggccagcaggtgcagacactccaggtagtccaggggcag
cctctgatggtccaggtgagcggtgggcagctcatcacatcgtcagggcaacccatcatg
gtgcaggccatgtcagggggtcaggggcaaaccataatgcaggtccctgtatctggagct
cagggactacagcagatccagctggtgcagccaggtcagatccagttacagggtggtcag
actctccagcttcagggccagcagggtcagccccagcaaatcatcatccagcagccccag
acagccatcactgctgggcagaaccaggggcagcagatcagcgtgcagggtcagcaggtg
gcacagacagctgacggtcagaccatcgtttaccagcctgtcaatgcagatggtaccgtc
ctgcagcagggaatgatcacaattccagctgccagcttggccggcgcccagattgtacag
gcagggggtgccaacaccaacaccactaacagcggccaaggcactgtgaccgtcaccctg
cccgtctccggcaacatggtcaatgcaggtggaatggtcatgatggtacctggaggtggt
ggagttcccacaatgcagcgtatccccctgccaggggctgagatgcttgaggaggagcct
ctctatgtcaacgccaaacagtaccatcggatcctgaagcgacgacaggcccgagccaag
ctggaggctgagggcaagatccccaaagaaagaaggaaatacctgcatgagtctcgccac
cgtcacgctatgcagcgtaagcgaggagatggaggacgtttcttttcccctaaggacaaa
gaggagatggctctggccctgtcacagcagcagcaggacgtagcccaggcagcagcagat
gagacggtggctcagatgatacgagtctcatag
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