Lates calcarifer (barramundi perch): 108876436
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Entry
108876436 CDS
T04895
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108876436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108876436
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108876436
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108876436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_11
zf-RING_6
RING_XB3-XBAT31
Prok-RING_4
Baculo_IE-1
Endonuclease_7
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
108876436
NCBI-ProteinID:
XP_018521454
UniProt:
A0A4W6EJM1
LinkDB
All DBs
Position
LG6:12833193..12836951
Genome browser
AA seq
200 aa
AA seq
DB search
MENTPNNRSDVVRKSTEDCAICLDKIQEKKVLKCLHSFCSACIDSVFKFKPACPICNTYH
GVYTGNQPNGTMTVMRGWQRLPGFENCGSIVIQYSFPAGIQGPEHPNPGVRYSSTSRTAF
LPACEEGEKVLKLLRKAFDRRLIFTIGQSATTGLNNVITWNDIHHKTSIGGGPQCFGYPD
PAYLFRVQEELRLKGVTEDD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacaccgaacaaccgctctgatgtggtccgtaaaagtacggaggactgcgcc
atttgcttggataaaattcaggaaaagaaggtgttaaagtgccttcactctttttgctct
gcgtgtatcgactctgttttcaagtttaagcctgcctgtccgatatgcaacacctaccat
ggagtgtacacggggaaccagccgaacggcactatgacggtgatgcgcggctggcagcgc
ctgcctggctttgagaactgcggaagtattgtcatacagtacagttttccagcggggata
caagggcctgagcacccaaaccctggagtgaggtacagcagcacctctcgcactgccttc
ctgccagcctgcgaggagggagagaaagtcctgaagctgctgaggaaagctttcgacagg
agactcatcttcacgatcgggcaatctgccaccacaggcctcaacaatgttatcacctgg
aatgatattcaccacaagaccagcattggaggtggtccacaatgttttggatatccagat
ccagcgtatttgttcagggttcaagaggagcttcgtcttaaaggagtaacagaggatgac
taa
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