KEGG   Lates calcarifer (barramundi perch): 108876460
Entry
108876460         CDS       T04895                                 
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108876460 (mkrn4)
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108876460 (mkrn4)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108876460 (mkrn4)
SSDB
Motif
Pfam: zf-CCCH_4 Torus zf-CCCH zf_CCCH_4 zf-RING_2 zf-CCCH_2 zf-C3HC4 zf-CCCH_3 zf-RING_UBOX zf-UDP zf-C3HC4_4 zf-rbx1 zf-RING_5 zf-C3HC4_2 zf-ANAPC11 zf-RING_11
Other DBs
NCBI-GeneID: 108876460
NCBI-ProteinID: XP_018521495
UniProt: A0AAJ7LFS2
LinkDB
Position
LG6:complement(12549430..12554645)
AA seq 379 aa
MEGAWRHAQNTWRMDSGRGGSICRHFINGSCRFGPRCNYRHEWPVIPSTQICRYYQKGGC
WYGERCRYLHVLQPGIDAAIAGRRGSVPIASSSSGAARAPPDRRGSEPALLQAEVMSRQE
CSRSATSDDISNTQYNIGSLASCITEEQSQDKDSLLTASWESLQSSDVAQAGACVGINEQ
QTSSAETTEDGATAATPSTHGKEEEVEAFLQSKNVACGICMDKVYEKTDPRNHVFGILPN
CSHSFCLQCIMTWRKTKDLGPDVVKSCPQCRVRSAFYVPNKYWVEGQAKESLIAAFKEKC
SKKSCSYYARHRCCPFKTECLYRHDKPTRRRSFPYPAEDDDYDGVDLLSFFIAMTLLGGE
DDDDDDFDFPFYLTEEYGF
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggagggcgcttggcggcacgctcaaaacacatggaggatggactcgggccgtggtgga
agtatttgtaggcatttcataaatggctcttgcagatttggtccaaggtgtaattatcga
catgaatggccagttataccgtcaactcaaatatgtagatactatcagaaaggtggatgc
tggtatggtgaacgctgcaggtatctccatgtccttcaacctggcattgatgcagctatt
gcaggtagaagaggctcagtgcctatagcctcttcctcctccggtgcggctcgcgctcca
cctgacagaagaggctcggagcccgcccttctgcaggctgaggtgatgtcaaggcaggaa
tgcagcagatcagcgacatcagacgatatttcaaacactcaatacaacattgggagtctg
gcatcatgtattactgaagaacaatcacaagataaagattctcttctaactgcttcttgg
gagtcactccaaagttcagacgtcgctcaggcaggtgcatgtgttggaataaatgagcag
cagacctcttcagctgagacaacagaggacggggctactgctgcgacccctagcacccat
gggaaagaggaggaagtggaggccttcctccagagtaaaaatgtggcctgtggcatctgc
atggacaaggtgtacgaaaagacagatccaaggaaccatgtttttggaatcttgccaaac
tgcagccactccttttgtttacaatgcatcatgacctggaggaaaacaaaagaccttggg
ccggacgtggtaaagagctgcccacagtgcagagtgaggtctgccttttatgtgccgaac
aaatactgggttgaaggacaagcaaaggagagtctaattgctgccttcaaagagaaatgc
agtaagaaaagctgtagctactatgcacgacacagatgctgtcccttcaaaacagagtgc
ctttatcgacacgataaacctacacgtcgcagatcatttccgtatcctgcagaagatgac
gactacgatggtgtagatctgctaagttttttcatagccatgaccctcctcggtggtgaa
gatgatgacgatgatgactttgactttcctttttacctgactgaggagtatggtttctga

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