Lates calcarifer (barramundi perch): 108876460
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Entry
108876460 CDS
T04895
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108876460 (mkrn4)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108876460 (mkrn4)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108876460 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-RING_2
zf-CCCH_2
zf-C3HC4
zf-CCCH_3
zf-RING_UBOX
zf-UDP
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108876460
NCBI-ProteinID:
XP_018521495
UniProt:
A0AAJ7LFS2
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Position
LG6:complement(12549430..12554645)
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AA seq
379 aa
AA seq
DB search
MEGAWRHAQNTWRMDSGRGGSICRHFINGSCRFGPRCNYRHEWPVIPSTQICRYYQKGGC
WYGERCRYLHVLQPGIDAAIAGRRGSVPIASSSSGAARAPPDRRGSEPALLQAEVMSRQE
CSRSATSDDISNTQYNIGSLASCITEEQSQDKDSLLTASWESLQSSDVAQAGACVGINEQ
QTSSAETTEDGATAATPSTHGKEEEVEAFLQSKNVACGICMDKVYEKTDPRNHVFGILPN
CSHSFCLQCIMTWRKTKDLGPDVVKSCPQCRVRSAFYVPNKYWVEGQAKESLIAAFKEKC
SKKSCSYYARHRCCPFKTECLYRHDKPTRRRSFPYPAEDDDYDGVDLLSFFIAMTLLGGE
DDDDDDFDFPFYLTEEYGF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcttggcggcacgctcaaaacacatggaggatggactcgggccgtggtgga
agtatttgtaggcatttcataaatggctcttgcagatttggtccaaggtgtaattatcga
catgaatggccagttataccgtcaactcaaatatgtagatactatcagaaaggtggatgc
tggtatggtgaacgctgcaggtatctccatgtccttcaacctggcattgatgcagctatt
gcaggtagaagaggctcagtgcctatagcctcttcctcctccggtgcggctcgcgctcca
cctgacagaagaggctcggagcccgcccttctgcaggctgaggtgatgtcaaggcaggaa
tgcagcagatcagcgacatcagacgatatttcaaacactcaatacaacattgggagtctg
gcatcatgtattactgaagaacaatcacaagataaagattctcttctaactgcttcttgg
gagtcactccaaagttcagacgtcgctcaggcaggtgcatgtgttggaataaatgagcag
cagacctcttcagctgagacaacagaggacggggctactgctgcgacccctagcacccat
gggaaagaggaggaagtggaggccttcctccagagtaaaaatgtggcctgtggcatctgc
atggacaaggtgtacgaaaagacagatccaaggaaccatgtttttggaatcttgccaaac
tgcagccactccttttgtttacaatgcatcatgacctggaggaaaacaaaagaccttggg
ccggacgtggtaaagagctgcccacagtgcagagtgaggtctgccttttatgtgccgaac
aaatactgggttgaaggacaagcaaaggagagtctaattgctgccttcaaagagaaatgc
agtaagaaaagctgtagctactatgcacgacacagatgctgtcccttcaaaacagagtgc
ctttatcgacacgataaacctacacgtcgcagatcatttccgtatcctgcagaagatgac
gactacgatggtgtagatctgctaagttttttcatagccatgaccctcctcggtggtgaa
gatgatgacgatgatgactttgactttcctttttacctgactgaggagtatggtttctga
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integrated database retrieval system