Lates calcarifer (barramundi perch): 108876508
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Entry
108876508 CDS
T04895
Name
(RefSeq) zinc finger protein 335 isoform X1
KO
K24371
zinc finger protein 335
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876508
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108876508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf_C2H2_LIN26-LIR3_2nd
zf-Di19
zf-C2H2_2
Zap1_zf2
Actin_micro
NMB0315_dom_I
zf-C2H2_ZNF142_18
GAGA
Motif
Other DBs
NCBI-GeneID:
108876508
NCBI-ProteinID:
XP_018521579
UniProt:
A0A4W6CGK8
LinkDB
All DBs
Position
LG6:complement(12286226..12297628)
Genome browser
AA seq
1590 aa
AA seq
DB search
MDSEENEVESSSDAGPSGMEEPSESGMGMESSEAMSADSSDAAASHAQAPESDCHVGQSS
EGLVVFIPETSSSTDVRVSSVHLPDSSSVAQSTSVSSVSTVTQSVLVSESPQVLVHSSAV
SDGAMMVSDSTASTSSDLGSAIDKIIESTIGPDIMNGCISVTSAEDGGAETTQYLILQGP
DDGAPMVAQMSSSALSNRIAIEALAEGPTSTCLDQGDLQGNLEPDQPDDQPGHSGYPEDS
SSQPDQPQHSHPSQYMDCSADGPDQTGESSSSYVECSGEEPDQTRSQSGFPDYSGDNSDQ
DLPGYVECSGADSNPTSRGHYVVECSAGYLECAVDDGEQLHHSRSYIDSSADHRSQTSRQ
YGAEYGGECVAAADSEQPGCSRYQARDDDEDDEQNQDPDQPQHSQQQPQHSCYMESSNGP
EASLYADDSSSSDHPLADTAGSGGLPEALECSESQPGPYISSSGTYTSNPEPELAQQCSP
SQEEPQGSHGPQDEAGLAREMETSTVAEGSGDRPPNLAELEEMMEVVIVQQFKCKMCPYK
SASKDTLINHMRDKHFKPAGDVPKKRKRGRPPKSETLARRQAEREEAEEKKAAKVKTAEP
HQAEEEEDDIVDAGAIDDPEEDSDYNPADEDCKGRPPAILKKPAPPISSSSQGRPRRKVG
RPRKYSSVEEGYNSKEAESIAKKPRVSADASVPEEASSSGLGNGPAVVTEGDTAEATISQ
SDSENKDPSSNTQPEEEFFQRKRGRPSKRFLRKKYKKYINRNRYYKSLKPLLRPHNCWIC
GSRFLTQEDLRFHVDSHEGNDPELFKCLQCNYRCKRWSSLKEHMFNHEGTKPFKCEECDY
TSVYRKDVIRHSAVHNKEKKRKTELVPKVSEFPCPVCHRVYPMQKRLTQHMKTHSSEKPH
MCDKCGKSFKKRYTFKMHLLTHIQSLGDSKFKCEFCDYTCDNKKLLLNHQLSHTNDRPFK
CDYCKYSTSKEEFLVSHLAIKHTGEKPFSCDMCHFMTKHRKNLRLHVQCRHPEAFEEWSV
AHPEEPVRRRRRPFFTLQQIEELKQQQDDTPGLQNTIVAVDSATLQAMQGMENASVSQDA
LGNTTIIYEQAESSDLSAQNALDLLLNMSNARELVGNSLQVAVLKSEGKPLEKGTWSTVT
TAPGQAQKVMTFHVSENGETVLQEAYEAAASETGELTQIAIEAYEGGGEFSVVEQAAEEI
HSPGYSNGESSPPQALEVSGSESMKSDKYYLTSAALPDGVLQQVELSSEAPPSPSAVSSP
SLSTKRFSCRICMESFHGRSDMENHKRAHLDANTFKCPDCDFTSTSWPEVKAHMEQHSYL
RPHKCPNCSFASKNKKDLRRHMMTHTNEKPFSCKLCGQRFNRNGHLKFHMERLHNQDHPT
RKNRTATSQQTIIVNSDEEALATLQSLQGHQTVITPERLQALGQEHIIVAQEQALSDQEE
GTYIQQITTIDGQTVQHLMTGDNQVTEVQYIISQDGVQHLIPQEYVVVADGNHIQMPDGQ
IIQYEHDGAFVQEQQIAVSHDGQIQYLPVSSEQQIVNPEELEAAAHTAVTAVAEAAMAQT
QTVYTEATPEQLEQLQQQGIHYDVITFTEE
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaggagaatgaggtggagagcagcagtgatgcaggcccctcaggaatggag
gagccatctgaaagtggaatgggtatggagtcgtcagaggccatgtctgcagacagcagt
gatgctgctgcctctcatgcacaggccccagagtctgactgccatgtgggacagagctca
gagggacttgtggtgttcatcccagaaaccagctccagtacagatgtcagagtttcatca
gtccatctcccagattcctcctcagtggcccagtccaccagcgtgtccagtgtctccaca
gtgactcagtcagtgctggtgtctgagtcacctcaagtgctggtccactccagcgctgtg
tctgacggagccatgatggtttctgactcaactgcttctacctcgtcagacctggggtct
gccattgacaaaatcatagaatccaccatcggccctgacatcatgaatggctgcatatct
gtgaccagtgcagaagatgggggtgcagaaacaactcagtatctgatattacaaggaccg
gatgatggtgctcctatggtagctcagatgtcatcttcagccctgtccaatcgtatagcc
atagaagctctcgctgaaggtcccacatccacctgtctggaccagggagacctgcagggc
aaccttgaacccgaccagcctgacgatcagcctggacactcaggttacccagaggacagt
agcagtcagcctgaccagccccagcactcccacccctcccagtacatggactgcagtgca
gatggcccggaccagacgggggagtcttcatcttcctatgtggagtgttcaggtgaggaa
cctgaccagacacgctcccagtctggcttccctgactacagcggggataacagtgaccag
gacctgccaggatacgtggaatgcagcggggctgactcgaaccccaccagccgaggtcac
tacgtggtggagtgcagtgccgggtatcttgagtgtgcggtggatgatggagagcagctg
catcattcacgcagttacattgacagcagtgcagaccaccggtcccaaacaagtcggcag
tatggggcagagtatggcggagaatgtgttgcagctgcagactctgaacagccgggatgt
tctcggtaccaggcaagggacgatgatgaagatgacgagcagaaccaggatccagatcag
cctcagcactcccaacagcagccccagcactcctgttacatggaaagcagtaatggtccc
gaggcctctctctatgctgatgacagctcctcgtcagaccaccctctggcagacacagca
ggctcaggagggcttcctgaggccctggagtgcagtgagagtcagcctgggccctacatc
agcagcagcgggacatacacctccaatccagagcctgagctggcccaacagtgctcaccc
agtcaagaggagccccagggctcccatgggcctcaggacgaagctgggctggccagggag
atggagacatcaacagtggcagaaggctctggagacagaccaccaaacctagctgagctg
gaggagatgatggaagtagtgattgtacagcagttcaagtgtaagatgtgtccgtacaag
agtgcctccaaagacacactcattaaccatatgagagacaaacacttcaaacctgcaggg
gatgtgccaaaaaaacgtaagcgtgggcggcctcccaaaagtgagacattggcccgccgc
caggcagagagggaggaagcagaagagaagaaagcagcaaaggtgaagaccgcagagccc
catcaggcagaggaagaagaggatgatattgtggatgctggtgctattgatgaccctgaa
gaggatagtgactacaaccctgcagatgaggactgcaaaggaagaccacctgccattctg
aaaaagcccgctcctcccatttcctcttcatctcaagggcgtccccggcgaaaggttggc
cgtccgaggaagtacagctctgtagaagaaggctacaacagcaaagaagcagaaagtatt
gctaagaagcccagagtcagcgctgatgctagtgtacctgaggaagcaagttcttccggg
ctaggcaacggccctgctgtggtgactgaaggagacactgctgaggccacaataagccaa
tcagactctgagaacaaagacccttcatccaacacacagccagaggaagagttcttccag
aggaaacgtggcagaccctccaaacgcttccttcgcaagaagtataagaagtatatcaat
cgaaatcgttactataaatccctcaaaccactcctgagacctcacaactgctggatctgt
ggctcgcgcttcctcactcaagaagatttgcgcttccatgtggactctcacgagggcaat
gacccggagctctttaagtgcctccagtgcaactatcgctgtaaacgctggtcctcactc
aaggaacacatgttcaaccatgagggtaccaagccttttaagtgtgaggagtgtgattac
acaagtgtctacaggaaagatgtcattcgccactcagcagttcataacaaagagaagaaa
agaaaaacagagttggtaccaaaggtgtcagagttcccctgccctgtgtgtcacagagta
taccccatgcaaaagagacttacgcagcacatgaaaacccacagctctgagaaaccacac
atgtgtgataagtgcggcaaatcctttaagaagcgctacacgttcaaaatgcacctactg
acccacatccagagtcttggagacagcaagttcaagtgtgagttttgtgactacacttgc
gacaacaagaagctgctgctcaaccaccagctgtcccacaccaacgacaggcctttcaag
tgtgactactgtaaatactccacttccaaagaggagttcctcgtctcccatctagccatc
aaacacacaggagagaagcctttttcctgtgatatgtgtcacttcatgaccaagcacagg
aagaacctgcgtctacatgtccagtgtcgccatcctgaggcgtttgaagagtggtctgtg
gctcatcccgaagagccagtgaggagacgacgcagacccttcttcaccctgcagcagata
gaggagctcaagcaacagcaggacgacacaccaggcttacagaacactattgtggcagtg
gattcagctacactacaagctatgcaagggatggaaaatgcctcagtgtcccaggatgct
ttgggaaataccaccatcatctatgaacaagctgagtccagtgatttgtctgcccagaat
gctctggacctgctgctgaatatgagcaatgcccgtgaattggttggaaactctttacag
gtggcagtgctgaagtcagagggcaaacctttggagaagggcacttggagtacagtgacc
acagcaccgggtcaggcacaaaaggtcatgaccttccatgtgtctgagaacggtgagaca
gttctacaagaggcttacgaggcagccgcctctgagacaggagagctcacccagatcgcc
atcgaagcctacgaaggtggaggggaatttagtgtggtggagcaggccgctgaagaaatc
catagccctggatacagtaatggtgagagcagtcctcctcaggctttagaggtctctgga
tcagagagcatgaaaagcgacaagtactatcttacttcagcagcgctgcctgacggtgta
ctgcaacaagtggagctgagcagtgaggctccaccctctccctctgctgtgagctctccc
agtctcagcaccaagaggttttcctgccgaatctgcatggagtctttccatggacgctct
gacatggagaaccacaagagggcgcacttggatgccaacaccttcaagtgtcctgactgt
gacttcacctccacctcttggccagaggtcaaggctcacatggagcagcattcctaccta
cgtccccataagtgtccaaactgtagctttgcctccaagaacaagaaagacctgcgccga
cacatgatgacccacaccaatgagaaacccttttcttgcaaactatgtggtcaaaggttt
aaccgtaatggccatctgaagtttcacatggagcgtctccacaatcaggatcatcctact
cgcaaaaaccgtaccgccacatctcaacaaaccatcatagtcaacagtgatgaggaggcc
ctcgccacactgcagtccctgcagggacatcagactgtgatcactccagagaggttgcag
gccttgggacaggagcacatcattgtagctcaagaacaggcactatcagatcaggaggag
ggcacatacattcaacagataaccaccatagatggacagacagttcagcatctgatgaca
ggagacaaccaggtgactgaggtccagtatatcatctcacaggatggagtacagcacttg
atcccgcaggagtatgtagtagtagctgacggcaaccacatacagatgccagatggacag
atcatccagtatgagcatgacggggcctttgtgcaggagcaacagattgctgtgagtcat
gacggtcagatccagtatctacctgtcagctcagagcaacagatagtgaatcctgaagag
ctggaggctgctgcacacactgctgtcacagcagtagcagaggcagcgatggcacagacc
cagacagtctacacagaagctacacccgaacagctggagcagctgcagcagcagggcatc
cactacgatgtcattaccttcactgaggaatag
DBGET
integrated database retrieval system
