Lates calcarifer (barramundi perch): 108876520
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Entry
108876520 CDS
T04895
Symbol
lhfpl5b
Name
(RefSeq) LHFPL tetraspan subfamily member 5b
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108876520 (lhfpl5b)
03037 Cilium and associated proteins [BR:
lcf03037
]
108876520 (lhfpl5b)
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108876520 (lhfpl5b)
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108876520 (lhfpl5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
DUF6677
Atthog
Motif
Other DBs
NCBI-GeneID:
108876520
NCBI-ProteinID:
XP_018521606
UniProt:
A0A4W6CPK4
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All DBs
Position
LG6:12456885..12461336
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AA seq
218 aa
AA seq
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MDLLPAQEAAKIYHTNYVRNSRAIGVMWAVFTICFVIITVVVFIQPYWIGDSVNTPQAGY
FGLFHYCIGNALTSELTCKGSVLDFGSIPSPAFRTAMFFVGISMLLIVGTMVCFSLFFFC
NAGNVYKICAWMQLASAVLMVMGCMIYPDGWDAPEVKRMCGQRTDKYTLGNCTVRWAYIL
AIISILDALLLAFLSFTLGNRQDKLLPDDFAVEGGGEG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcttccggcccaggaggcagccaaaatctaccacaccaactatgtgagaaac
tcccgggccatcggtgtcatgtgggccgtgttcaccatctgcttcgttatcatcaccgtg
gtggtcttcatccagccttactggatcggggacagcgtcaacaccccgcaggccggctac
ttcggcctcttccactattgcatcggcaacgctctgacctcggagctcacctgtaagggc
agcgtgctggacttcggctccatcccctcgccggccttcaggactgccatgttcttcgtc
gggatctccatgctgctgatcgtcggcaccatggtctgcttcagcttgttcttcttctgc
aacgccgggaacgtctacaagatatgtgcatggatgcagctggcctcagctgtgttgatg
gtgatgggttgcatgatctacccggatggctgggatgctccagaagtgaagagaatgtgt
ggccagaggacggataagtacacactggggaactgcaccgtgcgctgggcctacatcctg
gccatcatcagcatcctggacgccctcctcctggcatttctgtccttcactcttggcaac
cggcaggataaactgctgccagatgactttgcggtggagggaggaggcgagggttaa
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