Lates calcarifer (barramundi perch): 108876564
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Entry
108876564 CDS
T04895
Name
(RefSeq) protein Wnt-1
KO
K03209
wingless-type MMTV integration site family, member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108876564
04150 mTOR signaling pathway
108876564
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108876564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108876564
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Morphogens
108876564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
Motif
Other DBs
NCBI-GeneID:
108876564
NCBI-ProteinID:
XP_018521689
UniProt:
A0A4W6F8N4
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Position
LG6:complement(13566882..13573518)
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AA seq
370 aa
AA seq
DB search
MRSLALLLGVKAACILLVSSLSGTGAVNNSGRWWGIVNVASSSNLLTNSKNVQLVLDPSL
ALLSRRQRRLIRQNPGILHAIAAGLHTAIKECKWQFRNRRWNCPTTHSPAIFGKIVNRGC
RETAFVFAITSAGVTHAVARSCSEGAIESCTCDYRRRGPGGPDWHWGGCSDNVDFGRMFS
QEFVDSSERGRDLRYLINLHNNEAGRMTVSSEMRQECKCHGMSGSCTVRTCWMRLPSFRT
VGDFLKDRFDGASRVVYANKGSNRASHRADPRHLEPENPAHKPPSAMDLVYFEKSPNFCS
YNGKTGTLGTSGRTCNSSSPGLDGCELLCCGRGFKTRTETVTERCHCTFHWCCHVSCLNC
TSTRTLHQCL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtctggcgctgctgttaggggtgaaagccgcttgcatcctgctggtgtcttcg
ctctcaggcacaggggccgtcaacaacagcggccggtggtggggtattgtcaatgtggcc
tcctcatccaacctcctcaccaattccaagaatgtgcagttggtcctggaccccagcctg
gccctactgagtcgtcgccagcgccggctgattcggcagaatcctggcatcttgcatgcc
atcgccgctgggctgcacactgccataaaggagtgcaagtggcagttccgcaaccgccgt
tggaactgcccgaccacccacagcccagcaatttttggcaaaattgtcaatcgtggttgc
cgagagacagcgtttgtatttgccattaccagcgcaggggtgacccatgctgtggctcgc
tcctgctcagaaggggccattgagtcgtgcacatgcgattatcgccgccgaggtcctgga
gggccagactggcactgggggggctgcagtgacaatgtggactttggccggatgttcagc
caggagtttgtggactccagcgagagaggcagagatttgcgctacctcatcaaccttcac
aacaacgaagccggcagaatgactgtgtcttcggagatgcgccaggagtgcaagtgccat
ggcatgtcaggatcctgcactgtacgtacctgctggatgcgcctgcccagcttccgcaca
gtgggagacttccttaaggatcggtttgatggagcgtccagagttgtctacgccaacaag
ggaagcaaccgcgcctctcaccgagctgacccccgccacctggaaccggaaaacccggct
cacaaacccccctccgccatggacctagtctattttgagaagtcaccaaacttttgctcc
tacaatggcaaaactggcactttgggaacttctggaagaacatgcaacagctcttctcca
ggcctggatggatgtgagctgctttgctgtggacgtgggtttaagacccggactgagact
gtgactgaacgctgccactgcaccttccactggtgctgccatgtcagctgcttgaactgc
acaagtacacgaacgttacaccagtgtctatga
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