Lates calcarifer (barramundi perch): 108876579
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Entry
108876579 CDS
T04895
Name
(RefSeq) desert hedgehog protein
KO
K11990
desert hedgehog
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108876579
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108876579
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C46: hedgehog family
108876579
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GFIT
Motif
Pfam:
HH_signal
Hint
PsiB
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
108876579
NCBI-ProteinID:
XP_018521708
UniProt:
A0AAJ7PF71
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Position
LG6:complement(13516630..13522296)
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AA seq
463 aa
AA seq
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MKQSRWARLVQPCLLAAWTCIWLVQGCGPGPGYGIRPRPRKLTAMHYKQFFPNFSENNLG
ASGRAEGKITRNSERFNELVCNYNPDIVFKDEENTNADRFMTKRCKDCLNRLAIAVMNQW
PGVHLRVTEAWDEDGHHPPGSLHYEGRAVDITTDDRETEKYGLLAQLAVEAGFDWVHYES
KYHIHCSVKADHSVAVEKGGCFPGWARVTVAGGGQKSLSLLAPGDRVMALSGTGQVVFSQ
VILFLHRDQESWSTFLSLETEDGHRLALTPHHLVFLAPHCRSDSSEYQAQFASRAKAGDC
VLIHAAEGPVRPSRIISVSVEESMGVYAPLTETGTLFVDGVLASSYALVEHHRLAHWAFL
PLRLLSSFNQLLWGEATKEQQMTDGQTACTKTPFYCSTLATQDKTGIYVNNGILNKQNNM
SEPLRMEIKERCSSHSKTSDVHWYARLLYSFGCVFLDSNSFHP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtctcgttgggcccgcctggtgcagccctgcctgcttgctgcctggacctgc
atatggctggtgcagggatgcggaccaggccccgggtacggcatccgccccaggcccagg
aaactcacagccatgcactacaagcagtttttccccaacttctcagaaaacaacctcggg
gccagcgggagagcagagggcaagatcacccgcaactctgagcgcttcaacgaactcgtg
tgcaactataacccagacattgtcttcaaagatgaggagaacaccaatgcggaccgcttc
atgaccaagcgatgcaaggactgtttgaacaggttggctatcgcagtgatgaaccagtgg
ccaggtgtacacctacgtgtgacagaggcctgggatgaggacggtcaccatcctcctggc
tctctccactacgaaggccgggccgtggatataaccactgacgacagagaaacggagaag
tatggtctcctcgcccagctggccgtggaggctggctttgactgggtccactacgagtcc
aaatatcatatccactgctcggtaaaagctgatcactctgttgcagtggaaaaaggtgga
tgtttcccaggctgggcccgggtgactgtagctggaggggggcagaagagcctgtcattg
ctggctcctggggacagagtcatggccctgtctgggacaggccaagttgtgtttagccaa
gtcatcttgtttctgcaccgggaccaagaaagctggtctacttttctgtctctggagaca
gaagacggccatagattggccctcactccgcatcacttggtctttttagccccccattgc
agatccgacagcagcgagtaccaggctcagtttgcaagcagagccaaagcaggagactgt
gttctcatccatgcagcagagggtcccgtgcgtccatctcgaatcatctcagtctcggta
gaagagagtatgggagtgtacgcgcccttgacagaaacaggaactttgtttgttgatgga
gtgcttgcatccagctatgcactggtggagcaccacagactcgcacactgggcattttta
cctctgcgactcctgtcctctttcaaccagctgctctggggggaagcaacaaaagaacag
cagatgactgatggtcaaacagcttgcactaagactccattttattgtagcactttggcc
acacaggacaaaacaggtatatatgtgaataatggtattctgaacaaacaaaacaatatg
agtgaacctctgagaatggaaattaaagagaggtgctcctcgcacagtaagacatcggat
gtgcactggtatgctagactactgtacagttttggatgtgtctttttagactccaactca
tttcatccttaa
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