Lates calcarifer (barramundi perch): 108876581
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Entry
108876581 CDS
T04895
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03460
Fanconi anemia pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108876581 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108876581 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876581 (her9)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108876581 (her9)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108876581 (her9)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
108876581 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
108876581
NCBI-ProteinID:
XP_018521709
UniProt:
A0A4W6CFR5
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Position
LG6:11520327..11522310
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AA seq
292 aa
AA seq
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MPADTMEKQTASPIAGAPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSADTTVLGKYRAGFNECMNE
VTRFLSTSEGVNTEVRSRLLNHLSNCMGQMMSLNYPQQAPSQQAHLAQPLHVQLPSTLPI
SGAAVGSKLSPAEGVSPKVFGGFQLVPATDGQFAFLIPNPAFAPATAPVIPLYANAGVPV
AVNASPVHGSSAPTAASPVHGMTSFSGGSQQAVSPVGVSTGSESGEAVWRPW
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacactatggaaaagcagacggcatcccctattgccggtgctcctgcaaac
ggatcacacacaccggacaaaccgaaaaatgccagcgagcatagaaagtcatccaaaccc
atcatggaaaaacgccggagagcaagaattaacgagagcctcgggcagctcaagacactc
atcctggacgcacttaaaaaagatagctccagacactccaagttggaaaaagcagacatc
ctggagatgacagtgaagcacttgaggaacctgcagcgcgtgcagatgagcgcagcgctc
tcagcagataccaccgtcctgggtaaatacagagccggattcaacgagtgcatgaacgag
gtcacccgcttcctgtccacctccgagggggtgaacaccgaggtgaggtcgaggctcctc
aaccacctgtccaactgcatgggccagatgatgtccctgaactacccgcagcaggccccg
tcccagcaggcgcacctggctcagcctctgcacgtgcagctcccatccaccctgcccatc
agcggtgccgctgtgggctccaagctcagcccagcggagggagtctccccgaaggtgttc
ggcgggttccagctggtgcccgcgaccgacggacagttcgcctttttgatccccaacccg
gccttcgctccggccacggcccccgtcatcccgctttacgcaaacgcaggagtgcccgtg
gcggttaacgccagcccggtgcacggcagctcggcaccgaccgcagcgtctccggttcac
gggatgacgtccttctccggggggtcccagcaggcggtcagccccgtgggggtcagcacc
ggctcggagagcggcgaggccgtgtggaggccgtggtag
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