Lates calcarifer (barramundi perch): 108876607
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Entry
108876607 CDS
T04895
Name
(RefSeq) protein numb homolog isoform X1
KO
K06057
numb
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108876607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108876607
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
108876607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
NumbF
PTB
PID_2
DUF7461
Motif
Other DBs
NCBI-GeneID:
108876607
NCBI-ProteinID:
XP_018521748
UniProt:
A0A4W6D8Q7
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Position
LG19:complement(20447096..20485676)
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AA seq
659 aa
AA seq
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MNKLRQSFRRKKDVYVPESSRPHQWQTDEEAVRSGKCSFAVKYLGHVEVEESRGMHICED
AVKRLKTDRKFFKGFFAKAGKKPVRAVLWVSADGLRVVDDKTKDLILDQTIEKVSFCAPD
RNFERAFSYICRDGTTRRWICHCFMAIKDSGERLSHAVGCAFAACLERKQKREKECGVTA
TFDANRTTFTREGSFRVTTATEAAEREEVMRQLQDAKKAETDVKVAGNSATSVTNSSAHH
TGGSPSPSSSPPLSVPTLGPQAIPRRHAPAEALARQGSFRGFPALSQKTSPFKRQLSLRM
NELPSTMQRKSDFPMKNTVPEVEGESDSISSLCTQITTAFSGPPEDPFSSAPMPKPASSP
QSPVAPVNGTAPAFSVAATANPPVMPPALPARETNPWAKTPAGAPASAQPGSDWSSSTPV
IVVPPTSSPAISSHKRTPSEADRWLDEVTKSVRAPQPNPVMAAASPPTQPFTAPVPIPVA
SVPSVPFMSSLPPAVPMLPPRQPAFHAQAPASYPMSNGLPFPQPSVPVVGITPSQMVANV
FGSATQPQPFPVPASTTPQHDTQAVGSISPFIKPPQPTAMNPVHLQPSNGSVTFNGADNW
AAPSQLAPSSPATQPPPQQQEDAFEAQWAALESRSRQRTTPSPTNPFSTELHKTFEIQL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctacggcagagcttccgccggaagaaagacgtctacgtgccggagtcaagt
cggccgcaccagtggcagacagacgaggaggcggttcgcagcggcaaatgcagctttgca
gtcaagtacctgggacatgtggaggtagaggagtccagggggatgcacatctgcgaggat
gcagtgaagcggcttaagacggacaggaaattcttcaaaggattctttgcaaaagctggg
aagaagccagtgcgggctgtgttgtgggtgtcggcagatggtcttcgtgttgtagacgac
aaaacaaaggacctgattctggaccagacaatagaaaaggtgtcattctgcgctccggac
cggaactttgagagggcgttttcttacatctgcagggatggcaccacacggcgctggatc
tgccattgttttatggccatcaaagactcaggagagcgtctcagtcacgccgtgggttgt
gcattcgctgcctgtctggagcgaaaacagaaacgggagaaggagtgtggggtcacggca
acctttgacgccaacagaaccactttcacccgggagggctcatttcgtgttactacagca
acagaggcagcagagcgggaggaagtcatgaggcagctacaggatgctaaaaaagcagag
acggatgtgaaggttgctgggaactcggccaccagtgtgacaaattcctcagcacaccat
acaggaggttcaccatccccctcgtcctccccgcctctgtctgtgcccacgctgggacct
caggcgataccccgcagacatgcgccggccgaggctcttgccaggcagggctccttcaga
ggattcccggccctcagtcaaaagacgtctcccttcaaacgacagctgtcactgcgcatg
aacgagctgccctccaccatgcagcgcaagtcagatttccccatgaaaaatacagtacct
gaggtagaaggtgaaagtgacagcatcagctcgctgtgtactcagatcacaacagcattc
agtggacccccagaggaccccttctcttcagcaccaatgcccaagccagcctcatcccca
cagtctcctgtagcaccagtgaacggcacagctcctgccttctctgttgctgctactgct
aaccccccagttatgccccccgctctgcctgctcgagaaactaacccctgggctaagacc
ccagcaggggccccggcctcagcacagccaggaagtgactggtcatcctctactccagtg
atagtagtgccccctacatcctccccagccatatcctctcacaaacgaacgccatcagaa
gcagaccggtggttagacgaagtcaccaagtctgtccgggctccgcagccaaatccagtc
atggcagcagcatcgcctcccactcagccgttcaccgctcctgtgccgatacctgtggca
tctgttccctctgttcccttcatgtcttctctgccccctgccgtgcccatgttgccccct
cgccagcccgccttccacgctcaggctccagcctcctacccaatgtccaacgggctgccg
ttccctcagcccagcgtgcctgtggtcggtatcaccccttcacagatggtggctaatgtg
tttggctcagccacgcaaccccagccgttccctgtaccagcctctacgacaccccagcat
gacacccaggctgtcggcagtatcagcccgttcatcaaacccccacagcccactgccatg
aaccctgttcacctccagccatccaatggcagtgtgacctttaacggggcagacaactgg
gctgctccgtcccagctcgctccatcctccccagccacgcagccgcccccacagcagcag
gaagatgcctttgaggcccagtgggcagccttggagagccgctcgcgccaacgcaccaca
ccatccccgacgaatcccttctccactgagctgcacaagacctttgagatccagctctga
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