Lates calcarifer (barramundi perch): 108876616
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Entry
108876616 CDS
T04895
Symbol
zmp:0000000662
Name
(RefSeq) RING finger protein 145
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108876616 (zmp:0000000662)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108876616 (zmp:0000000662)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108876616 (zmp:0000000662)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-RING_11
Prok-RING_4
zf-P11
Motif
Other DBs
NCBI-GeneID:
108876616
NCBI-ProteinID:
XP_018521766
UniProt:
A0A4W6DJB3
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Position
LG19:20676047..20685201
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AA seq
839 aa
AA seq
DB search
MPRLEELANVALRVPSILVLDLLYKCDIEGLTEHLKAKNEDMLFKYKYVIWNMYYLGHLI
NVVVLVLPLRHIVTLYLHILAALLLYMGHQISKDYIREELQYGYEGAVYLDSLAFNRFVS
AMTSQIILSTLCAFLMKTRKVWLFSAHMLPLLARLCAAPHTTLLAVNTFAMGLTGSGIAI
FLLSNLFVPYRLARAAYSELLQVEVIELYRLLAVGISLWNQFAVPLLFSVFWFVLFIVQL
CSDVMSGNAASAAHQGIMFFLLTSVSECCATPYSLLGLTFVVSYLALGLLNLCKFYLGGY
AAVQNENVMHRGVTEGVTLLLLALQTGLLDMQALQRTFLLSIILFIVVTSTLQSMIEITD
PIILALGASRNRSLWKHFRGLSMCLLLLVFPVFMAYKISQFFHMDFWLLILVSSCMLTSL
QVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEW
SWMGASVIIIHSYFNVWLRGQSGWRSFLLRQEAAKKINSLPRATAQQLQQHNDVCSICFQ
EMSSAVITYCRHFFHGNCLRKWLYVQETCPMCHQTVRPTPTDQTEASGDAPAERDEGPDL
TAQEGNQNPDDGASQETQSNDVSPDSTEQEEEREGSEVGACGTEDKDQPAGPHMKAAQGL
RFSSSGDFVGFVSPASSCSPLNKHNTGEDRNRDSPLPSTHNDVNKNTMKGQCDSKGVGLE
DAATFCLRAPQNSNGEHDGCDETPESWNSSDSPQSNHADENQEAVSHGTSLVDSQTLVKS
CNENSELLDCIDNPQTHQGNSTYSDSDVYRLREAEPVPHTPRLSSVDAISSCTSTDNSD
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggctggaagagttggccaacgtcgccctcagggtgccaagcatactggtgctg
gacctgctgtataaatgtgatattgaaggtttaacggaacatctcaaggccaaaaatgaa
gatatgctcttcaaatacaaatatgtcatctggaacatgtattaccttggtcatctgata
aatgtggtggtgttggttctgccattgagacacattgtgaccctctacctccatatactc
gctgcccttctcttatacatggggcatcagatttccaaggattacattcgtgaagagctg
cagtatggttatgaaggagcagtttaccttgattctctggccttcaatagatttgtctcc
gcaatgacaagtcagattattctcagcacgttgtgtgccttcctgatgaagaccagaaag
gtgtggttgttctctgctcacatgctccccctgctggcccgactctgcgctgctcctcac
accacgctgctagctgtcaacacctttgccatgggactgaccgggtcagggatcgccata
ttcctcctctcaaatctgtttgtgccatatcggctcgccagggctgcgtattcagagctg
cttcaggtggaggtgatcgaactgtacaggcttctggccgtgggaatctctctgtggaac
cagtttgccgtcccattgctcttcagtgtcttctggtttgttctgttcatcgtccagctg
tgctcagacgtcatgtctggcaacgctgcctccgcagcccatcagggaatcatgttcttc
ctgctcacaagtgtgtctgaatgttgtgccacaccatactctcttctgggtctgaccttt
gtcgtgtcctatctggctctcgggctgctcaacctatgcaagttctacctgggaggttat
gcagcagttcagaatgagaatgtcatgcacagaggtgtgactgagggtgtcaccctgctc
ctgcttgccctccagacggggctgttagatatgcaggcactgcagcgcaccttcctcctc
agcatcatcctcttcatcgtggtcacttcaaccctgcagtcaatgatcgaaatcacagat
ccaatcattctggctttgggtgcatcccgcaacaggagtctgtggaaacacttccgtggc
ctcagcatgtgtctgcttctgctggttttcccagtgtttatggcttataaaatctcccag
ttcttccacatggacttctggctcctcatactggtgtccagctgcatgctgacttccctt
caggttacaggcactatgctgatatactccctcttcatggtggagctgtttcgcagcgac
ccgattgagagcctggatgaagtgatctactgggtgaacgctgtcagcagggtgctggag
tttgtggtggcgctctgcgtggtggcttatggcacctgggagtcgctgttcggggagtgg
agctggatgggcgcctctgtcattatcatccactcttactttaacgtttggctcagaggt
cagtctggctggaggagcttcctgctcagacaggaagcagctaagaagatcaactccctg
cccagagccacggctcagcagctgcagcaacacaacgacgtctgctccatctgcttccag
gaaatgagctctgctgtgatcacatactgtagacatttcttccatggcaactgcctccgc
aagtggctgtatgtgcaggagacctgccccatgtgccaccagacggtcagacccacccca
acagatcagactgaggcttcaggtgacgctccagcagagagagacgaaggaccagatctg
actgcgcaggagggaaatcaaaacccagacgacggcgcatcccaagagacgcaaagcaac
gatgtatctcctgattccaccgagcaggaggaggagagggaaggctctgaggtcggagcc
tgtgggacagaagataaagaccaaccagctggacctcacatgaaggctgctcagggtctt
cgtttcagctccagtggagactttgttggatttgtgagcccagcatcaagctgttctcct
cttaacaaacataacacaggtgaggacagaaacagggattcaccactgccatcaactcat
aatgatgtgaataagaatacaatgaagggccagtgtgactctaaaggagtaggacttgaa
gatgccgctactttctgtcttagagcgccacaaaacagcaatggtgaacatgacggctgt
gatgagacacctgaatcatggaacagctctgattcaccacaatcaaaccatgctgatgaa
aatcaagaggctgtctcacatggcaccagccttgttgatagccaaacactcgtcaaatca
tgtaatgaaaattcagaactcttagactgcattgacaatcctcaaactcatcaaggtaat
agtacttattcagactcggacgtgtacaggctcagagaggccgaacccgtcccacatacc
ccccggctgtcctctgtggacgccatctcctcttgcacaagcacagacaacagtgactga
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