Lates calcarifer (barramundi perch): 108876617
Help
Entry
108876617 CDS
T04895
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108876617 (sgca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Syndecan
DUF3377
Motif
Other DBs
NCBI-GeneID:
108876617
NCBI-ProteinID:
XP_018521770
UniProt:
A0A4W6E227
LinkDB
All DBs
Position
LG23:complement(4974090..4978021)
Genome browser
AA seq
399 aa
AA seq
DB search
MAGCGSWVFFLTVCAVSLFGANAEIKFTIPVGKFFTYELMRETFQSDFEPSSKLYRRLQD
DPMTFKCNRQKYPDLPEWLRFTQRHPYDNGFLYGTPTSPGKSIIEVYAINKQSYETARQI
IVIKIVAEKMLPYQAEVFIKLREIEKVLPSSVQDEIKQDLQKLWDTEALEIINITNALDR
GGRVPLPLAGHFEGVYVKVGSEQYFSDCLLRVLTPEYQRQCTAGAKVKVPGGCNFCSIPS
NCITWCKTELFDLTKQEPTPPAPTVGSGILEAGGDFDPPESPPSRDYFPDYIVTVIVPLI
LAIVLCLLLAYIMYGRREGVAKRNARTNQIQLYHHHTIHGNTDELRNMAGNRGVPPPLST
LPMFNSRTGETAPPLQSDSPSIPLIMAQHDPYSDTLPRK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctgcgggagctgggtcttcttcttaacagtttgtgctgtcagtttgttcggg
gccaatgcagagatcaaatttaccattcctgttgggaagttttttacatatgagctgatg
agagagactttccagagtgactttgaaccttcgtcaaaactctaccgacgcctacaggat
gaccccatgacttttaagtgcaacagacagaaatacccagacctcccagagtggttgcgc
ttcacccaacggcacccctatgataacggcttcctttatggcacgccgacatctccagga
aaaagcataattgaggtctatgccatcaacaagcagagctatgaaacagccagacagatt
attgtaatcaaaattgttgcagagaagatgctgccctatcaggctgaggtcttcatcaag
ctgagggagattgagaaggtgctgccctcttctgttcaggacgagataaagcaggactta
cagaagctgtgggacacagaggctttggaaattatcaatatcaccaatgccctcgaccgc
ggcggcagagttcccctccctctcgcagggcactttgaaggtgtgtatgtgaaggtgggg
tctgagcagtatttctcagactgcctcctgagggtgctgacaccagagtaccagaggcag
tgcacagcaggggccaaagtcaaagtccctggaggctgtaacttctgcagcatccccagc
aactgtatcacctggtgcaagacggagctgttcgatctgacaaagcaggagccgaccccg
ccggctcccaccgttggctcggggatactggaggctggaggtgacttcgaccctcctgag
tctcccccaagcagagactatttcccggactacatcgtgacagtgattgtgcccctgatc
ctcgccatcgtcctgtgtctgctgctggcctacatcatgtatggcagacgagagggagtt
gcaaaaaggaatgcaaggaccaaccaaattcagctgtaccaccaccacaccattcacggg
aacactgatgagctgaggaacatggccggaaaccgaggtgttcctccgcctctgtccacg
ctgcccatgttcaacagccggaccggggagacagctccacccctgcagtctgacagcccc
agcatccccctcatcatggctcagcatgatccctacagtgacacactgcccaggaaataa
DBGET
integrated database retrieval system
