Lates calcarifer (barramundi perch): 108876619
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Entry
108876619 CDS
T04895
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108876619 (psen1)
04330 Notch signaling pathway
108876619 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108876619 (psen1)
Peptidases and inhibitors [BR:
lcf01002
]
Aspartic peptidases
Family A22: presenilin family
108876619 (psen1)
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
108876619
NCBI-ProteinID:
XP_018521769
UniProt:
A0AAJ7LF30
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Position
LG19:complement(20404641..20417347)
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AA seq
487 aa
AA seq
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MANNAEDIENNMQNQQQSNGSPEPAQQPQEAGVTRVRSRGGSGAEGGGGGGGGRGGSGGG
NGSGPEQNGQPPAARAPRVVETEEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSV
SFYTQNDGQRLIYTPFPEDTDTVAQRALNSILNATIMITVIIVMTLVLVLLYKYRCYKVI
QGWLFLSSLLLLFFFSYIYLKEVFKTYNVAMDYFTLAVIIWNFGVVGMMCIHWKGPLRLQ
QAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLLAVLCPKGPLRILVETAQERNEPI
FPALIYSSTMVWLVNMADTDRPKRNSTEAASPQQETQQAVASPAPSSPSQDDGGFTPSWV
SQQEHQLGPLQTTEETRREIQQLPSARPPVEDDDEERGVKLGLGDFIFYSMLVGKASAAA
SGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDKL
ALHQFYI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaatgcagaggatattgaaaacaatatgcagaaccaacagcagtccaacggg
tcccctgaacctgcccagcagccacaagaggctggggtgaccagagtgcggtcaagggga
ggctcaggagctgagggaggaggaggtggaggaggaggaagaggaggcagtggaggtggc
aacggtagcggaccggagcagaacggacagcctcccgctgcccgtgctcctcgtgtggtg
gagactgaagaggacgaagatgaagagttgaccttgaaatatggggccaagcatgtcata
atgctgttcgttcccgtaaccctctgcatggtggtggttgtggcaaccataaagtctgtc
agcttctacacccagaatgacgggcagagattgatctacacaccgttccctgaagacaca
gacacagtagcacagagagccctaaactccatcttgaacgccaccatcatgatcactgtg
atcatcgtcatgactttggtgctggtgctgttatacaagtaccgctgctacaaggtgatc
caaggctggctcttcctctcctctctcctcctgctgttcttcttctcctacatctacctc
aaagaggtttttaagacctacaatgtggccatggactacttcaccctggcggtaataatt
tggaacttcggagtggtgggcatgatgtgtattcactggaaaggacctctgcgactccag
caggcctacctcatcatgatcagcgccctcatggccctggttttcatcaagtacctgcca
gagtggactgcctggcttatattagctgtcatatcagtctatgatttgttagcggtgctc
tgtcccaaagggcctctgaggatcctggtggagacggctcaggagaggaacgaacccatc
ttcccagctctcatctattcttctacaatggtgtggcttgtcaacatggccgacacagac
aggccaaagaggaactcaacagaagcagcttcgcctcaacaggagacccaacaggctgtg
gcgtctcctgccccctccagtccgtcacaggacgacggaggcttcaccccctcctgggtc
agccagcaggagcaccagctgggacctctccagaccacagaggagaccaggcgggagatc
cagcagttgccctctgctcgtcctcctgttgaagatgacgatgaagagaggggcgtcaag
ctcgggctcggagacttcatcttctacagcatgctggtgggaaaggcctcagccgcagcc
agcggcgactggaacaccacgctcgcctgctttgtagccatcctcattggcctgtgtctg
accctgctcctcctcgccatcttcaagaaagcgctccccgctctgcccatctccattttt
tttggcctggtcttctacttcgccacagacaacttggtacggccctttatggacaagctg
gcgctacaccagttctacatttag
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