Lates calcarifer (barramundi perch): 108876670
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Entry
108876670 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 5-like
KO
K23797
pleckstrin homology domain-containing family A member 4/5/6/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108876670
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108876670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
WW
PH_11
PH_3
PH_9
PH_8
Motif
Other DBs
NCBI-GeneID:
108876670
NCBI-ProteinID:
XP_050929227
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All DBs
Position
LG10:complement(9433492..9509382)
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AA seq
1255 aa
AA seq
DB search
MAADLQPEWISCLPSSWSYGVTRDGRVFFVNEEAKSTTWLHPVSGEAVITGHRKTPDLPT
GWEEGYTFEGARCFINHNERKVTCKHPVSGLPSQDNCIFVVNEQSASKAPANEKKERALN
TMSEASNYTGGSDYAANPSSPAGRPSRPSKKVHNFGKRSNSIRRNPSAPVIKRNWLYKQD
STGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFHISMLSVDDHINRKYAFKATH
PNMRTYYFCTDTAKEMESWMKVMTDAALVHSDPVKRLDRLKVEQCGPQEINHVANHRTPL
TQPEIQNNERNREVDLEHAAAVTTTTAEEERKQRDAERYGFQKDGAERERPLTKINSIKL
QPAQAAAVKANITSPQTPTEVDGSHRSPQVNGSSEQCPADGTGIPPQRSPTHEPDRTLSR
TSSMQQLEQWVRTQRGRNQDDDTRSITSYQTLPRNMPSHRVPYMPHYGDGYRSMPRNSMA
QRDSICSMSPSLYDQALGPSPTDKRRSMRDDTMWQLYEWQQRQAYSRQPGLYSNMASPKT
MINLSEHTMPSHSIPPSPSHGSLSMYGGYSPMRTYNMNSAHSEVSSPIYRRDMSIDRRHR
PQLNKYAYPPDRRSMPAGIPVQTITAQSLQGKTPEELTLLLIKLRRQQAELNSIREHTVA
QLMQLNMDGDNPKNDILSHHLQRNLMFLDNQLSPEDYREHAYTCTPEEVDIDTKLSRLCE
QDKVVRTQEDKLQQLYREKHTLETALLSASQEIEMGSDNPAAMQSVIQQRDLLQSGLLST
CRELSRVTAELERSWREYDRLEGDVILAKNNLLEQLEALGSPQTEPPSQQHVRIQKELWR
IQDVMEALNKHKAQRNAVDGMGFYGPKTNFTKHKNEEEDSVPPRPPLPQSYEPNPPTVPP
MPSHAGVRPSSLHRPEDRKANHRNGTHSGPDYRLYKSEPELTTVAEVDESNGEDRSEHPS
EREHSGNKGMSYPVGIVPPRTKSPVPESSSIASYVTLRKSKKPDPRMERPRSAVEQQLCA
AESGRPRMSVEEQLERIRRHQQGALREKKKGLSIRGGSQENTPSRSHSFTKENHFRSMQS
QMRRRDEVMSSDIQELEASLRQQEVVREQETPAEEIARLKEASQADHFNVDRELSVPDKV
LIPERYVESDPEEALSPEQEADKQRKVDRIKALIAKNSMQNVLPSVALSPEEETEEEVTV
QEKEKMINISYELAAEASKRSKLVAVKNLSSSSPPLPQSPNTPPQLTDGSHFMCV
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggatctacaacccgagtggatttcttgtctcccttcttcctggagttatggg
gttactcgggatggacgcgtcttcttcgttaacgaagaagccaagagtacaacctggctg
catccagtaagtggcgaggcggtaataaccgggcacagaaaaactccagacctacccact
ggttgggaagaaggatatacttttgagggagcacggtgctttatcaatcacaatgagcgg
aaggtgacctgcaagcatcctgtctcaggcttaccctcacaagacaactgcatctttgtc
gtcaacgaacaatctgcctccaaagcaccagcgaatgagaagaaggaacgagcactaaac
accatgagtgaggcctccaactacacaggcggctcggactacgctgcaaaccccagcagc
ccagcaggaagaccttcaagaccttccaaaaaagttcataattttgggaagagatccaac
tctatcaggaggaatcccagtgccccagtaatcaagagaaactggctttataaacaggac
agtacagggatgaaactgtggaaaaagaggtggtttgtgctgtctgacctgtgcctcttc
tactacagagatgaaaaagaggaggggatacttggcagcatcctcctaccaagctttcat
atatctatgttgtctgtggatgatcacattaacagaaaatatgccttcaaggcaacgcat
cccaacatgcggacatactatttttgcacagacacagccaaggaaatggagtcctggatg
aaagtaatgacagatgctgcacttgtacattcagacccagtcaaaaggttggaccgacta
aaagtagagcagtgtggaccacaagagatcaaccatgtggctaatcacaggacgccactc
acacagcctgaaatccagaacaatgaacgcaatcgcgaggttgaccttgagcacgctgcg
gcagtcaccaccaccacggcagaagaagagaggaagcagcgtgatgctgagcgctacggc
ttccagaaggacggtgcagagcgtgaacgtccactcaccaagattaacagtatcaaactg
cagccagcccaggcagcagctgtcaaagctaacattacctcaccccagactccaactgag
gtggatgggtcacaccgtagcccccaggttaatggatccagtgagcagtgtccggctgat
gggaccggaattcctcctcagcgaagtcccacccatgagccagaccgcaccctgagcagg
accagctctatgcagcaattggagcagtgggttcgcacacaaagaggacgtaaccaggat
gatgacaccaggagcatcacatcgtaccagacgctgcctagaaacatgccaagccatcgg
gtaccctatatgcctcattatggcgatggctaccgcagtatgcccaggaatagcatggca
cagcgggacagcatctgcagtatgtcgccatcattgtacgaccaggccctgggtccctcg
ccgactgataagcgccgctccatgcgtgatgacaccatgtggcagttgtatgagtggcag
caaaggcaggcctacagcaggcagccggggctctacagcaacatggccagtcccaagacc
atgatcaacctgtcagagcacaccatgccaagccactccatccccccctcgccttcccac
ggctccctgtccatgtacggcggctactctccgatgcgaacctacaacatgaacagcgct
cattccgaggtttcctctcctatctacagaagagacatgagcattgacagacggcacagg
cctcagctcaacaagtatgcctacccgcctgacaggaggtctatgcctgcgggaatccca
gtccagactatcactgcccagtctctccaaggcaaaacacctgaggaactgactctgctg
ctgataaagctgcggcggcagcaggcagagctaaacagtatccgggagcacactgtagca
cagcttatgcaactaaacatggatggcgacaacccaaagaatgacattctctcccatcac
ctccaaaggaacctcatgtttttggacaatcagctgagtccagaagactacagagaacac
gcctatacatgtacgccagaggaggtggacattgataccaaacttagcagattgtgtgag
caggataaagtggtgaggacacaggaggacaaacttcagcagctgtacagagagaagcac
accctggagacagcactgctgtcagccagccaggagatagagatgggctctgataaccca
gctgccatgcagagcgtcatccagcagagagacctgctgcagagcggcctgctcagcacc
tgcagagagctgtccagagtcactgcggagttggagcggtcgtggagggagtatgacaga
ctggagggagatgtgattttggctaagaacaacctgctagagcagctagaagcactggga
agccctcagacagaacctcccagccagcagcatgtccgcatccagaaagagctgtggagg
attcaagacgtgatggaggccctcaacaaacacaaagctcaaagaaatgctgttgatggg
atgggtttctatgggcccaagaccaacttcactaagcataaaaatgaggaggaagactcg
gtacccccacggccacccctaccccagtcctacgagcccaacccccctactgtgccccct
atgccctctcatgctggtgtgcgcccttcatcgctccacaggccggaggacaggaaggcc
aatcacaggaatggcacgcacagcggtccagactacaggctgtataagagtgaaccagag
ctcaccacagtagcagaagtggatgagagcaatggagaggacagatccgaacatccgtct
gagagagaacattctggaaacaaagggatgtcctacccagttggcatcgtcccacccaga
actaaatctccagtgcctgagtcatcctccatagcttcatatgttacgttaaggaagagc
aagaagcctgaccctaggatggagcgaccacgcagtgcagtagagcagcagctgtgtgct
gcggagagcggccggccccgaatgagtgtggaggagcagctggagaggatccgtcgccac
cagcagggtgccctaagggagaagaagaaaggcctcagcatccggggtggcagccaggag
aacacgccctcacgcagtcactcatttactaaagaaaaccattttcgcagcatgcagtcc
caaatgagacgcagagatgaggtgatgagcagtgacattcaggaactggaggcctctctt
aggcagcaggaggtggtgagggagcaggagacgcctgccgaggagattgcccgtctcaaa
gaagcctcgcaggctgaccactttaatgtcgaccgagagctttctgtgcctgacaaagtg
ctgattcctgaacgttacgtagagtcagaccctgaagaggctctgagccctgagcaagag
gctgataagcagaggaaagttgaccgcattaaagccctcatagcaaaaaacagcatgcaa
aatgtcctgccaagtgtggctctaagcccagaggaggagactgaagaggaggttaccgta
caggagaaagagaagatgattaatatctcctacgagctggcagccgaggcctccaaacgc
agcaagctggtagcagtgaaaaacctgtcgtcctcttccccaccccttccacagtctcct
aacacaccccctcagctcactgatgggtctcacttcatgtgtgtgtaa
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