Lates calcarifer (barramundi perch): 108876676
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Entry
108876676 CDS
T04895
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108876676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108876676
04131 Membrane trafficking [BR:
lcf04131
]
108876676
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108876676
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108876676
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108876676
mRNA cycle factors
P-body specific factors
108876676
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Myosins
108876676
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108876676
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108876676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
nSTAND3
AAA_22
Myosin_N
Motif
Other DBs
NCBI-GeneID:
108876676
NCBI-ProteinID:
XP_018521855
LinkDB
All DBs
Position
LG10:10336165..10351551
Genome browser
AA seq
1820 aa
AA seq
DB search
MAASELYSKCARVWLPDAAEVWKSAELIKDYTPGDLTLYLQLEDGTDVEYKIDPKTNSLP
PLRNPNILVGENDLTSLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
VDIINAYSGQNMGDMDPHIFAVAEEAYKQMARNEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVSCSAGEARVEEQVLASSPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHCIIGANMR
TYLLEKSRVVFQANGERNYHIFYQLCASSHLPEFKTFKLGCADDFHCTNQGQSPVIDGVD
DAKEMCNTRKAFSLLGICESDQMEIYQILAAILHLSNVEVKDQSADRSSILPDDVHLMVF
CELMGVPCEEMAHWLCHRKLKTTTETYVKPVSKMNAVNGRDALAKHIYARLFTWIVGRIN
NALKSAAKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFYDNQPCINLIEAKLGVLDLLDEECKMPKGCDDTWAQKLYNTLLKQNAHFDK
PRLSNRAFIIHHFADKVEYQCEGFLEKNKDTVNEEQINALKKSKFDLLLKLFEDDEKATG
SSNKPTSSIGRASQRDNKKTVGLQFRQSLHLLMDTLNATTPHYVRCIKPNDHKTPFTMDP
FRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDKKQTCKNLLANL
VKDQDKYQFGKNKIFFRAGQVAYLEKLRSDKLRMACVRIQKTIRCWLARKKYLRMKESAI
TIQRHVRGHQARCYVKFLRRTRAAVVIQRNVRMWATRRRYKQQRSAAITIQCVLRAYMAR
KQYYKLMFEQKAMVIQKWVRGWLARQHYRHTVGAIILLQSCVRRMRAKKELKKLKVEARS
VEHFKKLNFGMENKIMQLQHKINEQQKENRELTERLSVVEKTQTIERDRQSREIENLRKS
EQEARAKAETLPSLLEQLSFLQHELENIRREKEDLEEETKLYKEQTQQVVEELNMRNSSL
NSEKDELNMLIHEQAQQLTEIKTNTENTKQLEKDLTEERSRYQSLLSEHLHLEERHKELK
EEMDFNISTSKPGHKRTDSNYSSNSSEFSQSLGSTDGEDSSVQTEDETQPSVDLPVLLKL
QRRVKDLEQEKQALWQQLDKKEEAQQEKAKEVEEQRTVGRTELDLETLKRQELESENKKL
KQDLNELRKSLTSENSEVAPPAPGSMPYNILLEQLSSSNEELDMRKEEVLLLRSHMVRQE
ALKHKDSALGGSVKLDLTEIPSFQDVDRATDIHTLNEDGELWLAYEGLKETNRLLEFQMQ
EQERVNNEKCRKLLEEVSKLKDEKEQHQKLLAQSLLLPEDARIEMILKHEITRLTNDNLE
LMEQQEKQDKTIRKLKKQLKFYMKKVEDFEASAQQKSNASAMNAPVRAVHITRKEKEYQG
MLEYKEGDESRFLKNLVIDLKPRGVAVSLIPGLPAYIIFMCLRYADSVNDDQRVSTLLNS
TISSIKGVIKRRGGDFEVVSFWLANTCRLMHCLKQYSGDEVFTVHNSAKQNEHCLINFEL
SEYQQVFGDLAIQIYRQLIKCMEDILQPLIVASMLEHETIQGVLGSKPTGLRKRSSSFPE
EDAVTVEVLLQRLSLFHTTMSQHGMDSDIIKQVVKQQFYIICAVTLNNLLLRKDMCSWSK
GLQIRYNVWQLEEWLAERELADCGAKETLEPLVQAAQLLQIKKKTEADAQAICNMCTALT
TAQIVKVLTLYTPVIEFEERVSTTFITTIKNILKDRVESSTLMMDARKIFSITLPFTPSS
VALETIQIPASLNLSFLTRI
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaactttactccaagtgtgcccgtgtatggctcccagatgcagcagaa
gtgtggaagtcagcagagcttatcaaagattacactcccggcgacctgacgctgtatctg
cagctggaggatggcacggacgtggaatacaaaatagaccccaaaaccaacagcctgcca
ccactaagaaatcctaacatcctggtgggggaaaatgatcttacatctctcagttacctc
catgagccagcagtgctgcacaaccttaaagtgcgcttcattgactccaagttgatctac
acatactgcggaattgtcctggttgccatcaatccctatgagagcctgcctatctatgaa
gttgacatcatcaatgcctacagtgggcagaacatgggggacatggacccccatatattt
gcagtggcagaggaggcatataaacagatggccaggaatgagaaaaaccagtctatcata
gtgagcggtgaatctggggctggcaaaacggtctcagctaagtacgctatgcgttacttt
gccacggtcagttgctcagctggtgaggccagggttgaggagcaagttcttgcctccagc
cccatcatggaggcccttgggaatgccaaaacaacaaggaatgacaacagcagtcgcttt
gggaagtacattgagattgggtttgacaagaagcactgtataattggggctaacatgaga
acctacttgctggaaaagtctagagttgtgtttcaggccaatggagagagaaactaccat
atattctatcagctgtgtgcctcttcacatttaccagagttcaaaaccttcaagttaggt
tgcgcagatgacttccactgtactaaccagggtcagagcccagtaatagatggagtggat
gatgccaaagagatgtgcaataccaggaaggctttctcactgttaggaatctgtgaaagt
gatcaaatggaaatttaccaaattctggcagctattctccatcttagcaatgtggaggtg
aaagatcagtcagcagacagaagcagcatcttgccggatgatgttcacctgatggtgttt
tgtgagctgatgggggtgccctgtgaagaaatggcccactggttatgtcacaggaaactc
aagacgaccactgaaacctatgtgaagcctgtctccaaaatgaatgcagtcaatggcaga
gatgccttagctaaacacatctatgccagactttttacctggattgtgggcaggattaat
aatgctttaaaatctgcagccaaacagcactcattcattggtgtgctggacatttacggg
tttgaaacatttgatgtgaacagctttgaacagttttgcatcaattatgccaatgagaaa
cttcaacagcagttcaatctgcatgttttcaaactggagcaagaggagtacatgaaagag
gagatcccatggacactgattgacttctatgacaaccagccatgcattaacctcatcgag
gccaagctgggtgtcttggaccttttggatgaggaatgtaagatgcccaaaggctgtgat
gacacgtgggcccagaagctgtacaacaccctccttaagcagaatgctcactttgataaa
cccaggttatcaaatagagctttcatcatccaccactttgcagacaaggtggagtaccag
tgtgagggtttcctggagaaaaacaaggacacggtcaatgaggagcagataaatgcactg
aaaaagagcaagtttgatttgctgctgaagctgtttgaagatgatgagaaggcgacaggt
tcttcaaacaaacccactagcagcattggaagggctagtcagagggataataagaagact
gttggactgcagtttcgacagtctctacatttgctgatggacacactaaatgctacaact
cctcactatgtacgctgcatcaagccaaatgaccataaaactccattcaccatggaccct
ttcagggcagtgcagcagcttcgagcatgtggtgtccttgagacaatccgaatctcagca
gcaggcttcccatctagatggacctatcaagaattctttagtcggtatcgggtcctcatg
aaacaaaaggatgttctctctgataaaaaacagacatgcaaaaatctgctagcaaacctt
gttaaggaccaggataagtatcagtttggcaaaaacaagatcttcttcagggctggtcag
gtggcttacctggagaagctgcgttcagacaagctgcgcatggcttgtgtccgcatccaa
aagactatccgctgctggctggcccgcaaaaagtacctgaggatgaaggaatctgccatc
accattcagagacacgtacggggccaccaggcacgctgttatgttaagttcctgcgaaga
accagagctgctgttgtcattcagcggaacgtgcgtatgtgggcaactaggagacgctat
aagcagcagcgctctgcagctatcaccattcagtgcgtcttgagggcctacatggctaga
aagcagtactataagttgatgtttgagcaaaaggctatggtcatccagaagtgggtgaga
ggctggctggctagacagcattacagacacactgtgggagctatcatcctgctgcagagc
tgtgtgcgtcgcatgagggccaagaaagaactaaagaagttgaaagtggaggctcgctct
gtggagcactttaagaagctcaactttggcatggagaacaagattatgcagctgcagcac
aagataaacgagcagcaaaaagaaaacagagagctcactgagaggctgagtgttgtggag
aagacccagactattgagagagatagacagagcagagagatcgaaaacctacgtaaatca
gagcaggaggccagagccaaagcagaaacacttccctctctactggagcagctctccttc
cttcagcacgagttggaaaacatccgcagagagaaggaagacctggaagaggagacaaag
ctctacaaggagcagacacaacaggtggtagaagagcttaatatgaggaacagctcattg
aacagtgagaaagatgaacttaacatgttaatccatgaacaagcccagcagctgacagag
attaaaaccaacactgaaaatacaaaacagctggagaaggacttaactgaagaacgctct
cgctaccaaagtctgctgagtgaacatctgcatctggaggaacggcataaagaattgaaa
gaagagatggacttcaacattagtacaagcaaacctggtcacaagaggacagactctaac
tacagcagtaactcatctgagttcagtcagagcttaggctctactgatggagaagacagc
tctgtacaaacagaggatgagacccagccctcagtggacctgcctgtccttttgaagctc
cagagaagagtgaaggatctggagcaggaaaaacaggcactgtggcagcagctagataaa
aaagaagaagcccaacaagagaaggcaaaagaagtggaggagcagagaactgttggcaga
acagaactggatttggaaacactgaagcggcaagaattggagtctgagaacaagaagttg
aagcaggatctaaatgagctgcgaaagtctctgaccagtgagaatagtgaagtggcgcct
cctgcccctggctccatgccctacaacatattgctagaacaactcagctcttccaatgag
gagctggacatgcgaaaagaggaagtgctgctccttcgttctcacatggtccgccaagaa
gctcttaaacataaggactctgcactgggaggaagtgtgaaattagatctcactgaaatt
ccctcatttcaagatgttgacagagccactgacatccacacgctgaatgaagatggagag
ttgtggctggcttatgaaggcttgaaagagaccaatagactcctggagttccagatgcag
gagcaggaacgtgttaacaatgagaaatgtaggaagctgcttgaggaggtgagcaagttg
aaggatgaaaaggagcagcaccagaagctgttggctcagagcctcctcctgcctgaagat
gcccgaattgagatgatcctgaagcatgaaatcacacggctcaccaatgacaacctggaa
ctcatggagcagcaagaaaaacaagacaaaaccatacgcaagctgaaaaaacaacttaaa
ttttacatgaaaaaagttgaagattttgaagcgagcgctcagcaaaagagtaatgcctcc
gcaatgaacgcccctgtcagagcagttcatatcacccgcaaggagaaagagtatcagggc
atgttggagtacaaggagggtgacgagagccgcttccttaagaatctggtcatagatctg
aagcctcgtggtgtagcagtcagcttaattcctgggcttcctgcctacatcatcttcatg
tgcctgcgatatgcagacagtgtgaacgatgatcagagagtcagcactctcctcaactcc
accatcagcagcatcaaaggggtcattaagagaagaggaggtgattttgaagtagtgtca
ttctggttggccaacacatgccgcttaatgcactgtctgaagcagtacagtggagatgag
gtcttcacagtgcacaactctgctaagcagaatgagcactgcttgatcaactttgaactg
tcagagtatcagcaggtttttggggatttggccattcaaatctaccggcagctcatcaaa
tgcatggaagacatcctgcagccccttatagtggcgagcatgctggagcatgagacaatc
cagggagttctggggtccaaaccaacaggcctgaggaagagaagctccagtttcccagag
gaggacgctgttacagtggaagtcctcctccagcgtctcagcctcttccacaccaccatg
agtcagcatgggatggactcagacatcattaagcaggtggtaaagcagcagttttacatc
atctgtgcggtcaccctcaacaacctgctgctgcgaaaggacatgtgctcgtggagtaaa
ggcctgcagatcaggtacaatgtttggcagttggaggagtggttggcggagagagagctg
gcagactgcggtgccaaggagactctggagcctcttgtacaggctgcacaacttttgcag
atcaagaagaaaacagaggcagacgcccaagctatctgcaacatgtgcactgccctcacc
acagcacagattgtaaaagtgttgaccttgtacacgccagtgattgaatttgaagagcga
gtgtcgaccactttcatcacaactattaaaaatattttgaaagacagagttgagtcgtcc
actttgatgatggatgccaggaagatcttctccatcaccctccccttcacaccctcctct
gtcgctctggagacgatccagatccctgctagtcttaatctcagcttccttacccgcatc
tag
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integrated database retrieval system
