Lates calcarifer (barramundi perch): 108876678
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Entry
108876678 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876678
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Other basic domains
RF-X
108876678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
108876678
NCBI-ProteinID:
XP_050929257
UniProt:
A0AAJ8BB39
LinkDB
All DBs
Position
LG10:10296552..10311621
Genome browser
AA seq
1503 aa
AA seq
DB search
MADDQQQPGQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDNVEDLARFLLNSHYIGTKSMAALTVMTGTPTGIKTPTPASAFVPTAEANSFQPQVKTL
PSPSVDAKQQLQRKIQKKQQEQKLHSPLPSETQVKRAEASTPGPTIPCGSPALLSPQPTI
GIVVAAVPSPVTVQRSRQLMTSPSPVGTAEGKVLPVNFQVVTQSLKQSPKTPQNISASPV
GDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPTSHVSSVNVVKMTAIA
LAPSSSSSSTVRPASAGVSTTAASDDSQQSHGGTSAAPQSPAIRPSALASTPTLSADAKA
VSEADNNPTSGTEKTAAGVKEERVAKFRAASEPSFLVKCSPGPDKGVRIKTDPTSPPTSV
AVAGTQDSNNSNCHDSTLYLTVDNQSSNGNTSSNAXSAVTPTSKDSCPDAKSPRKRTGPG
GESHVIPVKRVFISQQPLAVVDNPKPGVSAVVKRIPRPGTPARPESAPCKVTVKHTPIGP
TQILALSDSPITHTEGSQTVVKPQALVVKHEDHSLSTDTSTGVAGNNPSDQALLQQITGD
PRAIPANSGAHEASVMSDLKSTIWEEGQLDELRKQAFAQQIPAEHKQAPTDQLSIIAQPP
EASGQLTLTQEMVDFAGSQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFSSCVDV
SLQGQSASNQGSILNAHQASTTFYHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLGHSLT
RESPCSRMAPITPVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHD
ASIVSSSPVKPMQRPMATHPDKAKLEWINNRYNSNTGGPLSNHSIGILPSYQDLVDDQFR
KPHAFAIPGQSFQAQSRQDAAHFGRLTPISPVQQQQQQQQQQQTSQQQQQQLVTGVTTPT
KQESFAVPAPLDNKASTSSASITFRCRSVSPAVRQRNFSGNTGPPTTTTNTTTTTRAVVS
PFNSPITSEVLSILSNSQTVSSVHSMAQRSQSVPLNIMMQSEMLPVQGQSNTAKITNVLL
SKMEADGDDSVRGLGINNLPSNYTARMNLTQILETTPGFAGGTAHQTQLPVSSSPAAFEL
QQHGYLSTGGGEQVSFTTGDSQAQAGPGEQDQQQQQQQQQQLQENPVQTQPQLLLQSTQQ
QEVEDEQQQLDFNNTVKDLLGDDGLNPSSQLVGQVASELNAVASDFSNDIRLTSDLSSSI
TDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSGFDWLESKDQPTTVE
MLG
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctggtcagaagcctgcctcgggattaggctctcttcca
gcgctggtgccgggactccaggggcccgaggcgaacgcgttgcagttcaaaataaagaat
tcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaagttt
acagacatcgaaaaactctacctctaccttaagttgccttctggtcccagcagtggcaat
gataaaaggactgagaatgagagggggtcctccactcctggattatgtgatcagagttcc
atgtcgtcaagccgtactcaacagatgtatgcattcaactggatacggaatcacctagaa
gagcacccagagacttccctcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatcttggctacaatccactgagtgcagcagactttggaaagatcatgaagaatgtc
tttcctaacatgaaggcacgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaagctttcgttcacatgccgtctttacccaacctggatctgcagaaa
tctggcgatgggtgtgagctgatggagccgacgggccagtcgccaagcgctgaggatgaa
atgagatctgcagcgtgtggactggtgtgtgagtgggctcaaaaggtcctgagtcgtcag
tttgacaacgtggaggacctggcccgcttcctgctcaatagccactacatcggtactaag
tccatggctgcactcactgttatgacaggaacacccacaggaattaagacgccaactcct
gcctctgcgtttgtgcccacagctgaggcgaactctttccagccccaggtgaagaccctg
ccctctccctctgtcgatgcaaagcagcaactgcagcgaaagatccagaagaagcaacag
gagcagaagctccactcaccgctgcccagcgagacccaggtcaagagagcggaggccagt
acccccggccccaccatcccctgtggcagccccgctctgctctcccctcagcccaccata
ggcattgtagtagcagctgtccccagcccagtcacggtacagagaagcaggcagttaatg
acctcaccgagccctgtagggacagccgagggaaaagtgttgcctgtcaacttccaagtg
gtcactcagtctcttaagcagtcccccaaaactccccagaatatctcagctagtcctgtg
ggtgaccgcctggcgcgacacggtacgcgatacgctcaaatcctgcccaagccctctgcc
accagtgccatcacgctgcgctcacctcccaccctgctcatcaccaacagccccattaaa
actgtgatgcccacttcccatgtgagctcagtcaatgtggtgaagatgacagcgatcgct
ctggctcccagcagcagcagcagctcaactgtgcgtcctgcctcggcgggtgtgagcacc
acagctgcttcggatgattcccaacaatcacacggtgggacctcggctgcgcctcagtct
cccgcaatcaggcccagtgccctggcctccaccccgaccctctccgctgacgccaaagcg
gtgtctgaagctgacaataaccccacctctggcacagagaaaactgctgctggagtcaaa
gaggagagagtggcgaagttcagggctgccagtgagccaagcttcctggttaagtgttct
ccgggaccagataaaggggtaaggataaaaactgaccccacatcccctcccacctctgta
gctgtagctgggactcaggacagcaataacagtaactgccatgacagtactttgtacttg
actgttgataatcagagctccaatggcaacacttcatccaatgctncatctgctgttacc
ccaacgtcgaaggattcctgcccagatgcaaagagtcccaggaagcgcacaggtccaggc
ggggagtcccatgtgattcctgtgaagagggtatttatctcccagcagccactggctgta
gttgacaatccaaaacctggagtcagtgctgtggtgaagaggatcccccgaccgggaacc
cctgccagaccagagagtgccccctgcaaagtgactgtgaaacacacacccatagggccc
acgcagatccttgcactctccgactcacccatcacacacactgagggctcccagactgtt
gtcaaaccccaggccttggtggtgaaacacgaagaccattctctcagcactgacaccagc
accggagtggctggaaacaacccatctgatcaggcgttgctgcagcagatcactggggac
ccccgtgccataccagccaactcaggagcacacgaagcctctgtgatgagtgacttaaag
agcacaatatgggaggagggacagcttgatgagcttcgaaagcaggcgtttgctcagcag
ataccagcagaacacaaacaagcccctactgaccaactgtccattatagctcagccccct
gaggcctcaggccagctcaccctcacgcaagagatggttgactttgcaggttctcagccc
aacatggactacttcccattcaatgatgacgacatgacccaggacagcatcgtggaggag
cttgtccaaatggaggagcaaatgaagctgaagggtctgttcagcagctgcgtcgatgtg
tctctacaaggccagtcggccagcaaccaaggctctatcctaaatgcccaccaggccagc
actaccttctaccactctgcccacagtagtaccactcccgtccaaactcccactccaacg
ccgacgcccaccccgacacccacccccacctcagaaatgacgcttgggcacagcctgacg
agggagagcccctgctcccgcatggcccccatcaccccggtggatggagccatgggccgc
cacacccccatcagcacaccactgtccaactgcagcagcagtgtccccccgagccctgta
gagtgcaggaacccttttgctttcactcccataaactcgagtatcacaggttatcatgac
gccagtattgtctccagcagccccgttaagcccatgcagaggcccatggcaacgcaccct
gacaaggccaagctggagtggatcaacaaccgctacaacagcaacaccggaggccctttg
tccaaccatagtattggtattctgcccagctaccaagacctggtagatgaccagtttcgt
aagccacatgcttttgcaattcctggccagtcatttcaggcccagtcgagacaggatgct
gctcactttggccgtttgactcccatttccccagtgcagcagcagcaacagcagcagcaa
caacaacaaacatcgcagcagcaacagcaacagctggtaacaggtgtaacaactcccact
aaacaggagagttttgctgtgcctgcaccgttagacaacaaagcatcgacctcatctgcg
tccatcactttccgttgccgcagtgtcagccctgcagtgcgccagaggaacttcagcggc
aacaccggcccgccgacgaccaccacgaataccaccaccaccacccgagccgtggtttca
ccctttaactcccccatcacctccgaggtgctcagcatcctgtccaacagccagacggtc
agctctgtccacagtatggcccagcgtagccagtctgtacctctgaacatcatgatgcag
agcgagatgctgccggttcagggtcagagcaacaccgccaaaatcaccaacgtcctcctc
agcaagatggaagctgacggggatgattctgtccgcggcctgggcataaacaacctcccc
tctaactacacggcacgcatgaacctcacgcagatcctggagaccactcctggcttcgct
gggggaactgctcaccagactcagctgcctgtcagctccagccctgctgcctttgagctc
cagcagcatggctacctcagcactggcggtggagaacaggtgagtttcaccactggggac
agccaagcacaagcgggtcctggtgagcaagaccagcagcagcagcagcagcaacagcag
cagctccaggagaatcctgtgcaaacacaaccacagctcctcctccagagcacacagcag
caggaggtggaggatgagcaacaacagctggatttcaacaacactgtcaaggacttgttg
ggggatgacggtctcaaccccagttcccagttggtgggtcaggtagcttcggagctcaac
gccgtggcgtctgacttctcaaatgacatcagactgacctcagatctgtccagtagcatc
actgaccttaacacattggacaccaacctgctgtttgacccgaatcagcagcaggaacaa
tatgaagattcaacactggaagaactgaagaacgacccgctttttcagcagatatgcagt
gatactgtgaactctggttttgactggctagaaagcaaagaccagcctactacagtagag
atgctgggctaa
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integrated database retrieval system
