Lates calcarifer (barramundi perch): 108876686
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Entry
108876686 CDS
T04895
Symbol
clpxb
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108876686 (clpxb)
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP100
108876686 (clpxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
Sigma54_activat
AAA_7
AAA_22
AAA_14
IstB_IS21
NACHT
AAA_16
nSTAND3
RuvB_N
Sigma54_activ_2
DEAD
ABC_tran
TsaE
AAA_18
AAA_25
ResIII
AAA_28
T2SSE
PduV-EutP
AAA_23
DUF5795
Motif
Other DBs
NCBI-GeneID:
108876686
NCBI-ProteinID:
XP_018521868
UniProt:
A0A4W6D7P1
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All DBs
Position
LG10:10395145..10405133
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AA seq
622 aa
AA seq
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MSCPCTSAARLFLNTAHRGLSCSRIQFFSLSRQGSRETPLPTRVRVRSFSETAVCYASKD
GTTKDGDGGKKSISEGKRLSGSGGSGKGGSQLRCPKCGDPCTHVETFVSSTRFVKCEKCH
HFFVVLSETDSKKGLNKEPESAAEAVKLAFAQKPPPPPKKIYAYLDKYVVGQSYAKKVLA
VAVYNHYKRIYNNIPAGSRQQVEVEKQPSLTPRELEMRRREDEYRFTKLLQIAGISPHGN
ALGASMQQQASQQAPQEKRGGEVLDSTHTDIKLEKSNIILLGPTGSGKTLLAQTLARCLD
VPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVEKAQQGIVFLDEVDKIGSVPGIHQ
LRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRIIS
RRKNEKYLGFGTPSNLGKGRRAAAAADLANTSGETDTVAEIEEKDRLLKHVEARDLIEFG
MIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCDLNVTQDALRAIA
RMALERKTGARGLRSIMEKLLLEPMFEVPHSDIVAVELDRDVVQGKSQPRYIRTPAKESA
EEEYDSGIEEENWPRQADAANN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtccttgcacttcggctgccaggttgttcctaaacactgcccacagaggattg
tcctgctcccggattcagttcttttctctgagtcgtcaggggtctagggaaacaccgtta
cccacccgggtacgggtgaggtcattttcagagactgctgtctgctatgcctctaaagat
gggacaacaaaagatggtgatggtggaaagaaaagcatcagtgaagggaagagactctct
ggctctggaggatcaggcaaggggggaagtcagcttcgctgccctaaatgtggagatccc
tgcacacatgtagagacctttgtatcatcaacacgatttgtcaaatgtgagaaatgccat
cactttttcgtggttctgtctgaaacggactcaaagaaggggctaaacaaagagccagaa
tctgctgcagaggcagtgaaactggcttttgcacagaaacctccccctccccccaagaag
atatatgcttatctcgacaagtatgttgttggccagtcctatgcaaaaaaggtgttagca
gttgcagtatacaatcattacaagcgcatctacaacaacatccctgctgggagtcgacag
caggtggaggtggagaaacagccctctctaacacctcgtgagctagagatgagaagacga
gaggatgaatacagattcacaaagctgctgcagattgcagggatcagccctcatggaaat
gctctgggagcgtccatgcagcagcaggcgagccaacaggcacctcaggagaagaggggt
ggggaagtcctggactccacacacactgacattaaactggagaagagcaacataatactt
ctaggtccaactggctctggaaaaacattgttggcacagacactggcacgttgtctggat
gtccccttcgcaatttgcgattgcaccacactaactcaagctggatacgtgggagaagac
atcgagtcggttattgctaaactgctgcaagatgccaactactcggtggagaaagcacag
caaggtattgtgttcctggatgaggttgataagattggcagtgtgcctggaatccatcag
ctgagagatgtgggcggagagggagtccagcagggtttgcttaaactcttggagggcaca
attgtcaatgttcctgagaaaaactccaggaaactgagaggagagacggtgcaggtagac
acaacaaacatcttgttcgttgcatcgggtgccttcaatggacttgacagaatcattagc
agaagaaagaatgaaaagtatttgggttttgggactccttccaacctggggaaagggcgc
cgtgcagcggctgcagcagacttggcaaataccagtggtgagacagacacagtggcagag
attgaagagaaggaccgactgctgaaacacgtcgaggccagggacctgattgagtttgga
atgatcccagagtttgttggccgacttcctgtggttgttcctctgcacagcctggatgaa
gaaacactagtccgaatcttgactgaaccacgcaacgccgtagtgcctcagtaccaggct
ctgttcagcatggacaaatgtgatctcaatgtgactcaagatgcattgagggccatagcc
aggatggctctggagagaaaaactggggctcgtgggctcagatccatcatggaaaaactc
cttctggagcccatgtttgaggtgccacactctgacatcgtggctgttgaactggacaga
gatgttgtccaaggaaaatcccaacccagatatatcagaactccagccaaggagtcagca
gaagaggaatacgactcgggtatcgaggaggaaaactggcctcgacaggcagatgctgct
aacaactga
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