Lates calcarifer (barramundi perch): 108876728
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Entry
108876728 CDS
T04895
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108876728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108876728
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
108876728
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
108876728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
TPR_12
SAP
Motif
Other DBs
NCBI-GeneID:
108876728
NCBI-ProteinID:
XP_018521936
UniProt:
A0A4W6D1A6
LinkDB
All DBs
Position
LG10:10235779..10242189
Genome browser
AA seq
1012 aa
AA seq
DB search
MTGRANKDKLRRSLSLTKSKRKGSVTAGISASDATTTPITSFFSSQPPSKLACPLCGQLV
PRFRINEHIDLQCQNFERGDSSAASASNSVVPSTQLSPRRNPPKSPELDRKKEEEEEEGV
KETKTSPYFKKNNSQLPPREINSKTVVRTIDLGSLSSKLSRKCHKVPERTKTDGKHATVH
FEKESDPPATLSSSQKENVLIQSLEDKKDCVTVIDLTETSAETPTAVGDLLCSEKVLNQK
TPTPETFQKLVTPKLRSTSSSKLAKRKKETTPDGKASGFRKKAKFEGNKEPEEVLSSENK
AEAGDMDWHKTEVPSTISCDLPLISEEGDKKSAAVSSSDSLPEFVSQQTIGDQAVESLHP
PRLPYYLHNFRTVLQAVLENEDDRALFNQDDMSLIHAFEKLSVMGQKLYVRLFQRKLKWL
QVNKLDYVEICSDLGPVAQELAQSGFLETENDLEDLGEALDLLPAPELKALAKTFHLGSS
GTQKQQLVDGLLRLSRQKSLFSFTPVQNNTKAVILKRAKQLAGSCVRLCRGPRAVFSRIL
LLFSLTDTMDEEEMAAGGQNQLFTILLVNSGRLAFPDYTVQRRAKVFQDREDLIRYEASM
RSLQEVISAMQAGQWEEALELYTAAKSAWQELRKSHDLSHQEELPVFLRSFTTGWAYTRI
LSRGVEILQRLRQYEEAVEELRSLLLQSVYCLDSRGRWWDRLALNLHQHLKKPEQAICAI
RDGLSDSLVRTGHKLSLHQRAVRMKESASFKKYRLQLRDLPTVHVQDVKHVTIRGQLFPH
EGGMGKSRFLLPANGEGTESADATVICSVEELSLAHYRQQGFDQGIHGEGSTFSTLFALL
LWDIIFMEGIPDVFRNPYQTCPLDLYTDCFYENRKEAIDSRVQLVSGASVETLHSMLEDV
WTSQEGKVCSLVNWERFSSLQQAQSLVSCLGGAFLGGVIVRMSKDYRHCRGGLPDLVVWN
TSNNTYKLVEVKGPNDRLSQKQQIWLDELQKLGADVEVCHVEATGARGARLE
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaagagcgaacaaagacaaactcaggcgaagtctgtcgttgacaaagagcaag
aggaaaggcagtgtcaccgctgggatatctgccagcgatgccaccacgactccaatcacc
tcgttcttcagcagccagcctccatctaagctggcctgccccctgtgtggccagttggta
ccaagattcaggatcaatgagcacattgatttgcaatgtcagaactttgagagaggagac
agcagtgccgcctcagcaagtaatagtgttgtgccaagcacccagctgtcacccagaagg
aatcccccaaagtccccagagctggatcgaaaaaaggaagaagaagaagaagaaggggtc
aaagagaccaagaccagtccttatttcaaaaagaataactctcaactgccaccacgtgag
ataaacagcaaaactgtggttaggacgattgacctgggaagcctctcctccaagttatct
agaaagtgtcataaggtacctgaaaggacaaagacagatggtaaacatgcaacagtgcac
tttgaaaaggagagcgatcctcctgcgacactcagcagctcccagaaggaaaatgttctg
attcagagtttagaggacaaaaaagattgtgtgacagttattgacctgacagaaaccagt
gctgagactccaacagcagtgggagacctattatgttcagaaaaagtacttaatcagaaa
acacctacaccagagactttccaaaaactagtcactccaaagttacggtctacttcttct
tcaaaactagcaaagaggaaaaaggaaacaactcccgatggcaaggcgtctggtttcaga
aagaaagcaaaatttgaggggaacaaggagccagaggaggtgttgtctagtgagaataag
gcagaagcaggagatatggactggcataaaactgaggtgccttctaccatttcttgtgac
ctccctctgatttcagaggaaggtgataagaaaagtgctgcagtcagcagtagtgattcg
ctaccagagttcgtctctcagcaaaccatcggtgaccaggctgtcgagagccttcatcca
ccacgacttccctactacctccataacttccggaccgtgttacaggctgtcttggagaat
gaggacgatagggctctgtttaaccaggatgatatgtcactcatacatgcatttgagaaa
ctatcagtcatggggcagaagctctatgtgaggctctttcagaggaagctgaagtggcta
caagtaaataaactagattatgtggagatatgcagtgatcttggacctgttgcccaggag
ctggctcagagcggttttctagagacagagaatgatcttgaggacctaggagaggctctg
gatctcctgcctgctcctgaactcaaagctctggctaagaccttccatttgggcagttct
gggactcagaaacagcagctagtggacgggcttcttcgtctgagcaggcaaaagtccctc
ttctctttcacccctgtacagaacaacactaaggctgtcatcctcaaaagggcaaagcag
cttgcaggttcctgtgtgcgcctctgtcgtggtcctcgggctgtcttctctcgcatcctg
ctgctcttttctctgaccgacaccatggatgaggaggagatggcggctggcgggcagaac
cagcttttcaccatcctgttggtcaactcaggacgtctggccttcccggactacacggtg
caacgtagagccaaggtgttccaggacagagaggacctgatcagatatgaagcatccatg
cgatccctgcaagaggtaatctcagctatgcaggcaggtcagtgggaggaggccctagag
ctttacactgcagccaaaagtgcctggcaggagctgaggaaaagccatgacctcagtcat
caggaagagctgcctgtgttcctgcgcagcttcaccacaggatgggcttacactcgaatc
ttatccagaggggttgagatcttgcagaggctacgccagtatgaggaggcagtagaggag
ctgcggtccttactgttgcagtctgtttactgtcttgacagccgagggcgatggtgggac
agactagcactaaaccttcaccagcacctcaaaaaaccagagcaagctatttgtgcaatt
agagatgggctgtcagactctctggtacgaacaggacataaactctccctgcatcagaga
gctgttaggatgaaagagtctgccagcttcaagaagtatcgcctgcaactcagagactta
cccactgttcatgtccaagatgtcaagcatgtgacaatccgaggacagctgtttcctcat
gagggaggcatggggaaatctaggtttcttttaccagcgaacggagagggcacagagagt
gctgatgccactgtaatatgttctgtggaggaactgtctttagcacattaccgccaacag
ggttttgaccaagggatccatggtgagggttcaacattctcaacattatttgcccttttg
ctgtgggatatcatttttatggagggtattccagacgttttccgaaacccataccagacg
tgtccactggacctttatactgactgtttctacgagaacagaaaggaggcgattgattct
cgtgttcagttagtcagtggggcgtctgtggagacactacacagcatgttggaggatgtg
tggacctcacaggagggtaaagtgtgctcactggtaaactgggagcgtttctcatccctt
caacaggcacagtcactcgtgtcttgcctgggtggagccttcttaggaggagtaatagta
agaatgtcaaaagactatagacactgccgtggaggtttgcctgatctagtggtgtggaac
acctcaaataacacctacaagttggtggaggtaaaggggcccaatgaccggctgtcccag
aagcaacagatctggctggatgagctgcagaaactgggggctgatgtggaggtgtgtcac
gtggaggctactggagccagaggagctcgtctggaataa
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