Lates calcarifer (barramundi perch): 108876729
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Entry
108876729 CDS
T04895
Symbol
apba2a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
KO
K20055
amyloid beta A4 precursor protein-binding family A member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108876729 (apba2a)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
108876729 (apba2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
DUF494
Motif
Other DBs
NCBI-GeneID:
108876729
NCBI-ProteinID:
XP_018521937
UniProt:
A0A4W6D0Y8
LinkDB
All DBs
Position
LG10:complement(10226258..10236149)
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AA seq
836 aa
AA seq
DB search
MAHGKRPGAISKILAPSPPPCPGPGLAKQSQEERRGLVKEASEQPPGTLKDNNNDQLTPA
SANHYYMSCDPSPEDMEDTCSEYDNVGSDVEQDYDEVLHLNREGMVDMRYYKQYCPEDGG
YIKHAGGDNINENSSAVDQFSPRARHSTEICEGSQSDTKPHKMGHRFRSHCTTIAGDEAE
REVEKGQENRFFFSDGDEIEEVLDGAKFIEDLEETENSVQRPTSLYQGNDNERITKGGDE
REREDDTRLTRNHTIQGASKKCESSHVGSKEKERQSKGRGRRGTGEDVEHIVSGIKGCTT
NSTEQRPKTSSKDCKKAAVRTKARSGPGKQHPPPPPRHSHAQPPAETQKAQPRRETPPVP
RPSPSSANSQENEPRVIKPSLAPHHTPEQQREPLEERQRQPEKPQQQGEKPSTAVMPEDV
PEQPRRPHCSELIPAEETNTPKKTQEATSFPSFEDVPGPCEPEDLIDGIIFAANYLGCTQ
VLSDKNPSKSVRMSQAHEAVSRIKSQDEDSQMMTEVDLFISTKAVKVLNADTQETMMDSA
LRTISYIADIGSIVVLMARRRMSQASSEDFSESPDSASEGKSQYRMICYVFESEDAQLIA
QSIGQAFSVAYREFLRANGINPTDLSQKQYSDIINSQEMYHDDLVHFSNSDNCKELYVEK
QKGESLGVVIVESGWGSILPTVILASMMNSGPAARSGKLSVGDQIMSINDTSLVGLPLAT
CQGIIKGLKNQVKVKLSIVSCPPVTTVLIKRPDLKFQLGFSVQNGIICSLMRGGIAERGG
VRVGHRIIEINGQSVVAMAHEKIVQTLSVSVGEINMKTMPAVMFRLLTGQETPIYI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctcatggtaagaggccaggagccatttccaaaatattggctcccagccctccaccg
tgccccggtccaggactcgcgaaacagagccaagaggagcggcgaggtttggtgaaggag
gcgtctgagcaaccacctggcaccttgaaggataacaacaatgaccagctgactcctgct
tctgcaaatcactattacatgagttgtgaccctagtcctgaggacatggaggacacctgc
tctgagtatgacaacgtgggctctgatgtcgagcaggactatgatgaggttctgcatctg
aacagagagggcatggtggacatgaggtattacaagcagtactgtcctgaggatggcggc
tatataaagcatgcaggaggtgataatattaacgagaacagcagtgctgtcgaccagttc
tctccccgggctcgtcatagcacagaaatatgtgagggatcgcaatctgacactaagcct
cataagatgggccatcgctttaggtcacattgtacgacgatcgctggggatgaagcagag
agggaggtggaaaagggccaggagaacaggttcttcttcagtgacggagatgagatagaa
gaggtgctggatggggccaaattcatagaggatttagaggagacagagaacagcgttcaa
agaccgaccagcctttatcagggcaatgataatgaaagaattacaaagggaggcgatgaa
agggagagagaggatgacactcgacttacaagaaaccatactatccaaggagccagtaag
aagtgtgagtcatctcacgtgggttcaaaggagaaggagaggcagagtaaaggacgaggg
aggaggggaacaggagaggatgtcgagcatattgtttctgggatcaaaggatgcacgacc
aacagcactgagcagcgtccaaagacttcgtcaaaggactgcaaaaaggccgctgtgcgg
accaaagctagatctggccccggtaagcagcatcctcctcctccaccccgtcattcccat
gcccagccacctgctgagacccagaaggcccagcctcgtagagagactcctcctgttccc
agacccagtccctcctctgctaacagccaggagaacgaacccagggttatcaagccatcg
ctggctccccatcacacgccagaacaacagagggagcctcttgaggagaggcagagacag
ccagagaaaccccagcagcagggtgagaagccaagcacagccgtgatgcctgaggacgtg
ccagagcagccgaggaggcctcattgttcagagctcatccctgcagaggagaccaacaca
cccaagaaaacacaggaggctacttctttccccagctttgaggatgtcccaggtccctgt
gaaccagaggatcttattgatgggatcatctttgctgctaactaccttggctgcactcag
gtgttgtctgataagaatccatccaagtctgttcgcatgtcccaggcccatgaagctgtc
agtcgtatcaagagccaggatgaagactctcaaatgatgacagaggtggacctgttcatc
tccacaaaagctgtcaaagtgctgaatgctgacacacaggagacaatgatggacagtgcc
ttgcgtaccatctcctatatcgctgacattggtagcattgtggttctgatggctcggagg
cgcatgtctcaggcttcatcagaggatttttcagaatctcccgattctgccagcgagggg
aagtctcagtacaggatgatctgctatgtctttgagtcagaggatgcacagctcatcgca
cagtccattggtcaggccttcagcgtggcctacagagaattcctgcgagccaacggcatc
aacccaaccgacttgagccagaaacaatacagtgacatcatcaactcccaggaaatgtac
cacgatgacctcgtccatttctcaaactcagacaactgtaaagagctgtacgtggagaag
cagaaaggagaaagcctcggtgtggtgatcgtggagtccggctggggctccattctgccc
actgtcatcctggccagtatgatgaacagtggccctgcagctcgctctggaaaactcagt
gttggggaccagattatgtccattaatgacaccagcctggtggggctgccgctggccacc
tgtcagggcatcatcaagggtctgaagaatcaggtgaaagtaaagctgagtattgtgagc
tgccctcccgtcaccaccgtcctcatcaagagacctgatctcaagttccagctcggcttc
agtgttcagaatggcattatctgcagtctgatgcgaggtggcattgcagagcgaggcggc
gttcgtgttggacacagaatcattgaaataaatggtcagagtgttgttgccatggcacac
gagaagattgttcaaaccctgtccgtctcagtgggtgagatcaacatgaagacgatgccc
gctgtgatgttcagactgctgacaggacaggagacgcctatctacatttag
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