Lates calcarifer (barramundi perch): 108876735
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Entry
108876735 CDS
T04895
Name
(RefSeq) anoctamin-3 isoform X1
KO
K19498
anoctamin-3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108876735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108876735
Ion channels [BR:
lcf04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
108876735
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GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
Motif
Other DBs
NCBI-GeneID:
108876735
NCBI-ProteinID:
XP_018521949
UniProt:
A0AAJ7LHK1
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Position
LG10:complement(10435964..10468897)
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AA seq
1012 aa
AA seq
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MFVPLLESQTSRSSGGDRHVPINPTISHSASWSSSLANSFHSGGTETETDQHSSMHTSIS
EILKEKSLKPSRRSLPCLAQSQTHPINLNHFLSVPLSPEPKPEVEGLSQSISTSCSLLPP
QTAEDGKDHYVEESEVTTCETRADESFLLQKPATRAKLEARTDSLQGKNRADSSGLFFRD
GKKRIDYILVYKKSSPQVEKRCTFEKNLRAEGLMLEKEPSLTNNDIMFVKVHAPWDTLCK
YAEQMNIRMPFRKKCYFTDWKSKTLGSRFHLRCRQIKSWLPRNPMKLDKEALPDLEETDC
YTAPFSRARMHHFTINNRETFFSNSTRSRIVHHVLQRTKYEDGKSKMGINRLLGNNTYEA
AFPPHEGGYKSRHPIKTHGAQNHRHLLYERWARWGIWYKYQPLDLIRRYFGEKIGLYFAW
LGWYTGMLIPAALVGVFVFLYGLFTMDSSQVSKEICEANTTIMCPMCEETCDPWTLSDSC
VYAKVTHLFDNGGTVFFAIFMAIWATVFLEFWKRRRAELTYDWDLIDWEEEEEELRPQFE
AKYSRVERVNPISGKPEPFQPFSDKLSRLMVSVSGIFFMISLVLTAVFAVVVFRLIVMEK
FASFNWKFVKKNWQFATSGTGVCINFMIIMSLNVVYEKVAYLLTNLEHPRTESEWENSFA
LKMFLFQFVNLNSSTFYIAFFLGRFAGRPGKYNKLFNRWRLEECHPSGCLIDLCLQMGVI
MFFKQIWNNFMELGYPLLQNWWSRRKIKKGGGGRQNVENKAQLPQWDKDWNLQPMNAHGL
VDEYLEMVLQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKFVTQWRRPMPARATDIGI
WHGILEGIGVLAVITNAFVIAITSDYIPRFVYAFKYGPCMDKGHHHEDECLRGYMNSSLS
VFDMSELKNSSQPRYCRYRDYRAPPWSPVPYEFTLQFWHVLAARLAFIIVFEHLVFGIKS
FIAYLIPDMPKDLCDRMRREKYLMQEMMYEAELEHLQKERKKNGRRYHHEWP
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcccctgctggagagtcagacgtccagatcctctggaggcgacaggcatgtt
cccatcaatcccaccatcagccactcagcatcctggagctcctcgcttgccaacagtttc
cactctggaggcacagagacagagaccgaccagcactccagcatgcacaccagcatcagc
gagatcctgaaggagaagagcctgaagccgtctcgccgcagcctgccctgtctggcccag
agtcagactcatccaatcaacctcaaccacttcctgtctgtgcctctgagcccagagccc
aaaccagaagtcgagggtctgagtcagagcatcagcacctcctgcagcctcctccccccg
cagacagcagaggatggcaaggatcattacgtggaggagtcagaggtgactacatgtgaa
acaagggcagacgagtcatttctgctacaaaagcctgccactcgtgctaaattagaggcc
cgcacagattcacttcagggaaagaatcgagctgactcctctgggctctttttccgagat
gggaaaaagcgcattgactacatcctggtgtacaagaagtccagtccacaggtggagaag
aggtgcacatttgagaagaatttgcgtgctgaaggcctgatgctggagaaagagccctcc
ttgacaaacaacgatatcatgtttgtgaaggtccatgctccttgggatactctttgcaaa
tacgcagagcagatgaatatccgaatgcctttcaggaaaaaatgttacttcacggactgg
aagagcaaaaccttgggcagcaggtttcatctgagatgtcgtcagataaaaagctggctt
cccagaaatcccatgaagctggacaaagaggccttgcctgacctagaggagaccgactgc
tacacagctcccttcagcagagcacgcatgcatcacttcactatcaacaacagagagacc
ttcttctccaattccaccaggagcagaatagtccatcatgtcctgcagcgcaccaagtac
gaggatggaaaatcgaagatggggatcaaccggttattgggcaacaacacatatgaggct
gcatttcctcctcatgagggtggttacaagagcagacatccaattaagacacatggcgcc
cagaaccacaggcatcttctatatgagcgctgggcccgttggggcatctggtacaaatac
cagcctctggacctcatcaggcgttactttggtgagaaaatcggcctttattttgcgtgg
ttgggctggtacaccggcatgttaattcctgccgccctggttggtgtttttgtcttcctc
tatggtctgttcactatggactccagccaagtcagtaaagagatatgtgaagccaacact
accatcatgtgtcccatgtgtgaggagacctgtgatccgtggacactgagtgacagttgc
gtctatgcaaaggtgacccatctgtttgacaatggcggcactgtgttctttgctatcttc
atggctatttgggccacagtatttctggagttctggaaaaggaggagggcagagctgact
tatgactgggatctcattgattgggaggaggaagaggaggagctgaggcctcagttcgaa
gccaagtactccagggtggagagagtcaaccccatttctggcaagcccgagcctttccag
cccttctcagacaaactcagccggctcatggtgtctgtgtccggaatattcttcatgatt
tccctggttctgacagccgtgtttgccgtggtggttttccgtctgattgtgatggagaag
tttgcttccttcaactggaagtttgtgaaaaagaactggcagtttgccacctctggcacc
ggagtctgcatcaactttatgatcatcatgtctctcaatgtggtatatgaaaaggtggcc
tatctgctgactaatttagagcacccacgaacagagtctgagtgggagaacagtttcgct
ctgaagatgtttctgttccagtttgtaaatttgaacagctccacgttttacattgctttc
ttccttggaaggtttgctggcagacccggaaaatacaataaactctttaatcgatggaga
ctggaggagtgtcacccgagcggctgtttgattgatctgtgcctgcaaatgggagtcatc
atgttcttcaaacaaatctggaacaacttcatggagctcggttatcccttgctgcagaac
tggtggtctcgtaggaagataaagaaaggaggtggaggaaggcagaatgtagagaataaa
gcccagcttccgcagtgggacaaagactggaatctacagccgatgaacgcccatggactg
gtcgatgagtaccttgaaatggttctccagtttggcttcaccaccatctttgtagcggcg
ttcccgctggctcctctcctggccctgctcaacaacatcattgagattcgtcttgacgcc
tacaagtttgtcactcagtggaggagacccatgcccgcccgagccactgacataggtatc
tggcatgggattctcgaaggtatcggcgtgctggcagtcatcaccaacgccttcgtcatt
gccatcacctcagactacatcccccgctttgtttacgccttcaaatatggcccatgcatg
gacaagggacaccaccacgaggacgagtgtttgcgaggctacatgaacagcagcctgtct
gtgtttgacatgagtgagctgaagaacagcagccagcctagatactgcaggtacagagac
tacagagcgccgccctggagcccagtgccgtacgaattcaccctgcagttctggcacgtc
ttggctgccaggctggccttcatcatcgtcttcgagcacctggtgtttgggatcaagtcc
ttcatagcatacctcattccggacatgccgaaggatctctgcgaccgcatgaggagggaa
aagtacctgatgcaggagatgatgtacgaagcagaactggagcacctgcagaaggagagg
aagaagaatggacggcgttatcaccacgagtggccttag
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