Lates calcarifer (barramundi perch): 108876743
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Entry
108876743 CDS
T04895
Symbol
si:dkey-29p10.4
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25
Organism
lcf
Lates calcarifer (barramundi perch)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4_3
DUF2180
ArsA_ATPase
Rx_N
Motif
Other DBs
NCBI-GeneID:
108876743
NCBI-ProteinID:
XP_018521965
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Position
LG10:9701827..9706826
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AA seq
759 aa
AA seq
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MGASLDTPARCPLCNELTREPVTLKCNHRFCRRCIGDLWSVTPNGPYHCPEWRCKTVYQT
LPFDRSLIRQPSPSRRAQPRSTTATSSNDEQNVLDSALRRPSLSSQLLGKRKASTPAPEQ
PDTKRPTVESPRERFSDTETPTISSSDKPGQSTVVGTSKETVHPPSTGSEHGDGTSSSDR
ADREAVPASDVPQDVPVQQSQCKSEVVVTLDDSDSSNEVDICDSPPLATPREGTQVTGLH
ATPKKAASPANSDSFPGVSTPSKDKSPVHHVKPPVIFTKHPATASGSSSPVNIFSRPENK
KNSPVPCHYCPKTGYQSAVKTCLVCGASMCTEHLRPHLDSPVFQNHTLVPPMEDISPWRC
QEHQEINRIYCRQCGVCVCTVCTVIGSHRDHVCISIREAERELRGNLKEEIKQLQDAEQQ
VKNRLAELTHKKETSKVVLSEAGEGVQQQYRAIREALEQEEQSALQCVMKEESRVLGGLE
EKLSHLQSSLLSIQRGLHTLEGLADAKGDKRIQDQAFIMEYSKIAQLAGNMGSIVEQFEA
PEEVDRDRLKCLQRWTERRLDTVIITVPGKDRDLYKLLYGTIPYLDEDTAHSKLQLSENN
RRVTYSETPQFYAEHEARFSSFPQVLAASALEEGRWYWEVNVSVDDGRWKVGLCEGQIER
KGQKDNSRLGFNSYSWCLACDRKKVEALHNKVSVPVDVDRLQRVGVFLDFEEGILSFFNV
TLGGSLVLMHSYKHRFTDPLYPAFSVSKTHLAICDLFQS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggggcatcgttggacacccctgcgaggtgtcctctttgcaacgagctgacccgggag
cccgtcaccctgaagtgcaaccaccggttctgcagacgatgtatcggagacttatggagc
gttaccccgaacgggccgtaccactgtccggagtggaggtgtaaaactgtgtaccagact
ctgccgtttgatcgcagcttgatacggcagccctccccgagtcgacgggctcagcctcgc
agcaccacagccacatccagtaacgatgaacaaaatgtacttgactcagcattgaggagg
ccgtcactcagcagccagctcctggggaagagaaaggccagcacacctgcaccagagcaa
cctgacacgaagcgaccaactgtggaatctccccgtgagcggttcagtgacactgagact
cccaccatttcctcctcagataaacctgggcagtcaactgtcgtggggacgtccaaggaa
acagtgcacccaccgtctacagggtctgagcatggtgatggcacatcctccagtgacagg
gctgaccgtgaggcagtacctgcaagtgatgtgccgcaagatgtcccagtccagcagagc
cagtgtaaatcagaagtcgtcgtcacactggatgactctgacagctcaaatgaagtagat
atatgtgattcacctcctcttgcaacccccagggaaggcacacaagtgacaggacttcat
gcaacaccaaagaaagctgcctcacctgccaactctgattcttttcctggggtctcaacc
ccaagtaaagacaagtctcctgtacatcatgtcaagccacctgtgatattcaccaaacac
cctgctactgcttcgggatcctcaagtcctgttaacatcttttccaggccggagaacaaa
aaaaacagcccagtgccctgccattattgccctaaaactggatatcagtctgctgtgaag
acttgtctggtgtgcggagcttccatgtgtacagagcacctgcgtccccacctggactca
cctgtgtttcagaatcataccctggttcctccaatggaggacatttctccctggaggtgc
caggaacaccaggaaataaacaggatctactgtcggcagtgtggagtgtgtgtgtgcaca
gtgtgtaccgtcataggctcccatcgcgaccacgtctgcattagtatcagggaggcagag
agagagctcagggggaacctgaaagaagagatcaaacaactgcaggatgctgaacagcag
gtgaagaacagattggctgaacttacacacaagaaagagacctccaaggtggttttaagt
gaggcaggagaaggggtgcagcagcagtacagagctatcagagaggccctggagcaggag
gagcagtcagctcttcagtgtgtgatgaaggaggagagcagggttcttggtggactagag
gagaaactcagccacctccagagctccttgctatccatccagcgaggcctacacaccctg
gaggggctggctgatgccaagggagacaaacgcattcaggaccaggccttcataatggag
tacagcaagatagcccaactggctggtaacatggggagcattgtggagcagttcgaggcc
ccagaggaagtggatcgcgacagactgaaatgtttgcagaggtggaccgagaggcggctg
gacacagtgatcatcactgtacctggcaaagacagagacctctacaaactgctttatggt
accattccctacttggacgaagacacagcccattccaagctgcagctgtctgagaacaac
aggagggtgacctacagtgagactccccagttctacgcagagcacgaggctcgcttcagc
tcctttccccaagtcctggccgcctctgccctggaggaaggccgctggtattgggaggtg
aacgtgtctgtcgatgatggccgctggaaggtggggctgtgcgagggacagatcgagagg
aagggccaaaaagacaactctcgtttgggcttcaacagttactcatggtgcctggcctgc
gataggaagaaggtagaagccctacataacaaagtatctgtcccagtagatgtggacagg
ctgcagagggtgggagtgttccttgattttgaggagggtattttatcattctttaatgtg
acactagggggcagtctagtactaatgcattcctataagcacaggtttactgatcctctt
tacccagccttttctgtatctaaaacacacctggccatctgtgatctgttccagtcgtga
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