Lates calcarifer (barramundi perch): 108876778
Help
Entry
108876778 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108876778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108876778
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
90S particles
GTPase
108876778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
RNA_helicase
AAA_16
AAA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108876778
NCBI-ProteinID:
XP_018522026
UniProt:
A0AAJ7LHJ6
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MDGKVKEQKRHQAKHSGPKAQKKLKKQGGSTEEDECKRNPKAFAVQSAVRMAKTFHRAQD
IKTKKHHIPLVDRTPLEPPPVVIVVVGPPKVGKSTLIRCLIKNFTRQKMGDICGPVTIVS
GKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMGV
LTHLDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFISVM
KFRPLVWQTSHPYVLVDRMEDLTDPERVRTDPKCDRTVSLYGYLRGTHLKNKGQVHVPGV
GDFQVSDVNFLPDPCPLPDAQKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDLPANHVN
QQQEEVRPTTELVQSLIDTHATLDAKMAASKVSLFSGSVTLDPTDIEQQSGEKEGPHEKQ
VWDPNTQRERRAVVFTEEEEEEDAVTGSSDEEDDNSEDSEQEKEADEEDDNLSTFLKDAR
ARSERTEKTAPPVKRQRVEEEMLVFADSEDDLEMSEEESEEKGQSGRAGDSGHCSEEDEE
ETEDEEEEDDDQESDDESVEEEGAALMEQTASESEEEGEKGTLKWKEGLQQKASEAFLRH
QEAAPNLRKLVYGSVVEADDSEEDKEELGGLFRVSRPQKSKKFKANAVDCSRFIPDTSHN
WDLEEMLNSIRDCFVTGKWEESQDAATLLKEDEELYGDFEDLETGEVHKGQTGLQDQAEN
SEKDDDNDDEAEESLVKVDDEEVQKNKRLDKKRRLKERFDAEYDDGDATYFDDLKEEMQK
QAELNRAEFEDVDDETRVQYEGFRPGMYVRLEISSIPCEFVINFDPHYPVILGGLGSSEG
NIGYLQMRLKKHRWYERILKTRDPLILSLGWRRFQTIPLYHIEDHNGRHRLLKYTPQHMH
CGASIWGPITPQGTGFLAVQSVAGTKANFRIAATGVVLDLDKSVTVVKKLKLIGYPYKIF
KNTCFIKGMFNTVLEVAKFEGASVRTVSGVRGQIKKALSTPPGAYRATFEDRLLMSDIVF
LRSWYPVSVPQLYNPVTSLLLPVGQKDNWAGMRTMGQLKHDLGIRNKPNADSLYKPIVRG
QRHFNPLHIPKELQKSLPFKSKPKQQQSKGKTPRDLQRPSVIREPHERKVAALLHALSTV
HNYKRKKAHMVQHAKHKEFLQQKGKQEEAKLKRQKEARKKLYRVMGQMDRKKLRSSLKGA
PQED
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaggtgaaggagcagaagcgacatcaggccaaacacagtggaccgaaggca
cagaagaagcttaagaagcagggaggctcaacagaggaggatgaatgcaaacgaaacccc
aaagcatttgcagttcagtctgctgtccgcatggccaagaccttccacagggcccaggac
ataaagaccaagaaacatcacatcccccttgtggaccgaactccccttgaacctcctcca
gtcgtgattgtggttgttggcccccccaaggtgggaaaaagcacccttatccgctgcctg
atcaaaaacttcacccggcagaagatgggggacatatgtggacctgtgaccattgtctct
ggaaagaagcggcgccttactttcatggagtgtaacaatgacataaacactatgattgac
cttgctaaagtagctgacttggttttgatgctgatcgatgccagctttggctttgagatg
gagacttttgagttcctcaacatctgtcaggtacacggctttcctcgtatcatgggtgtg
ctgactcatttggattcattcaagaacaacaagacactgaggaagacaaagaaaaacctc
aaacatcgcttctggacagaggtctaccagggagccaagctgttctatctgtctggtatg
gtgtatggtgaatatcagactcaggaagtgaagaacctgggccgtttcatttctgtcatg
aagttccgtcctctggtgtggcagacctcccatccctatgtgttggtcgaccgtatggag
gacctgactgacccagagagggtgagaacagacccaaagtgtgaccggactgtgtcactc
tatggttacctgagagggacacatttgaaaaacaaaggccaggtccatgtcccaggtgta
ggagactttcaggtgtcagatgtgaacttcctacccgacccgtgtcctctgccagatgct
cagaagaagagagcactgaatgagaaagaacgtctgctctacgcacccatggctggagtt
gggggggttgtgtatgacaaagatgctgtgtatatcgatcttcctgccaaccatgtaaat
cagcaacaggaggaggtgcgacccaccacagagctggtccagtctcttattgacacacat
gccaccttggatgcaaagatggctgccagtaaagtttctttgttcagtggctctgtcacc
ctggacccgactgacattgagcagcagagtggagaaaaggagggtcctcatgagaagcag
gtctgggatcctaacactcagagagagaggagggcggtggtcttcactgaggaggaggaa
gaggaagatgctgtcactggttccagtgatgaagaggatgacaacagtgaggacagtgag
caggagaaggaagcggacgaagaagatgataacctttctacatttctcaaagatgcaagg
gccagatctgaaaggacagaaaaaactgccccaccagtgaagagacagagggtagaggag
gaaatgctggtgttcgctgacagtgaagatgacctggagatgagtgaggaggagagtgaa
gagaaggggcagtctgggagagcaggagactctggacactgttctgaggaggatgaagaa
gagactgaagatgaagaagaggaagatgatgatcaagagtcagatgatgaatcagtggaa
gaggagggtgctgcactgatggaacaaacagcaagtgagagtgaggaggagggagagaag
gggactctgaagtggaaggagggtctgcagcagaaagcgtcagaggcatttctacggcac
caagaagctgcccccaatctgagaaaattggtttatggttcagttgtagaggcagatgac
tctgaagaagataaagaggagttggggggcctgtttcgagtcagtcgccctcaaaagagc
aaaaagttcaaggcaaatgctgtggactgttcccgcttcatccctgacacctcccacaac
tgggacttggaggagatgttaaactccatcagggactgctttgtaacagggaagtgggag
gaaagccaagatgcagccacactactgaaagaagacgaggagctgtacggtgactttgag
gatttggaaacaggagaagtccacaagggacaaactgggctgcaggatcaggctgagaat
agtgagaaggatgatgataacgatgatgaagctgaggagagtctggtgaaggtggatgat
gaggaggtccagaagaacaagcgtctggataagaaacgcagactaaaggagagatttgat
gcagaatatgatgacggagatgctacgtactttgatgacctgaaggaggagatgcagaaa
caggctgagctgaacagggcagagtttgaggatgtggacgatgagaccagagtgcagtat
gaaggcttccgtccaggaatgtatgtcagattagaaatctcctctatcccctgtgaattt
gtcatcaactttgatccccattacccagtcatccttggcggtctgggctccagtgaaggc
aacataggatacctgcagatgcgacttaagaaacaccgctggtacgagcgcatcctgaaa
acacgggaccccctcatcctgtccttaggctggaggcgcttccagaccatccctctctat
cacatcgaggatcacaacggacgccaccgcctgctcaaatacactccacagcacatgcac
tgtggagcctccatctggggtcccatcacaccacagggcactggtttcctggctgttcag
tcagtagcaggaactaaagctaatttccgtattgcagccacaggagtggtcctggatctg
gataaatcagtgactgtagtgaagaaactcaaactcatcggttatccctacaagatcttc
aagaacacatgcttcattaagggcatgttcaacacagtgctagaggtggcgaaatttgaa
ggtgcttctgtgcgaacagtgtcaggggtcagaggtcagatcaagaaggcgttgtctaca
ccaccaggagcttacagagccacgtttgaggaccgcctgcttatgagtgacattgtgttc
ctgcgttcctggtatccagtgtccgttcctcagctctacaaccctgtcacctctctgttg
ctgcctgttggtcagaaggacaactgggcaggcatgaggaccatggggcagctcaaacat
gatctgggcatccgtaacaaacccaacgctgactctctgtacaagccgatagtccgaggc
caaaggcatttcaaccccctccacattccgaaggagctccagaagtccctgcccttcaag
agtaaacccaaacagcagcaatccaaaggaaagacacccagagacctgcaacgccccagt
gtgatcagagagccccacgagagaaaggtggcggccctgctccatgctcttagcacagtt
cacaactacaagaggaagaaagcccacatggtgcagcatgccaaacacaaggagttcctg
cagcagaaggggaaacaggaggaggccaagctgaagagacagaaggaggcacgtaaaaaa
ctgtaccgtgtcatgggccagatggaccggaagaagctcaggtccagtctgaagggggcg
ccacaggaggactga
DBGET
integrated database retrieval system
