Lates calcarifer (barramundi perch): 108876807
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Entry
108876807 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: LLGL scribble cell polarity complex component 2
KO
K06094
lethal(2) giant larvae protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108876807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108876807
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108876807
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_VPS8
WD40
Beta-prop_NOL10_N
WD40_WDHD1_1st
DSE1_N
Motif
Other DBs
NCBI-GeneID:
108876807
NCBI-ProteinID:
XP_050925036
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MKRFRRHGQESQRDRLKQELFQFNKAMEHGFPHQPSALGYSPSLQLLAIGNRSGAIKLYG
APGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHKGLSELLEIGRFMLX
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFVVEVPGFRELEERNISLDQVASSVPD
DYIGRRNLEHVEALQENPVNPNQVVIGYGRGLMVIWDLEKQCAIQHIPATQQLESVWWTE
DGSYILSSHSDGSYCRWMVGGEDVNEEEEKSDIPYGHFPCKAISKIVQLPTVEGPPFLLF
SGGMPRASYGDRHCITVIHSKTHVALDFTSRIIDFFVIRDGDTGDPSALVVLVEEELVVI
DLQTEGWPVIQTPYLVPLHSSAITCSHHISAIPLKLWERVIAAGELQNTHYSKKPWPITG
GQNLASDPPQRDLLLTGHEDGTVCFWDASGVCLYPMYKLSTAGVFHTDTDPNDNMNQGTE
GEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTVEA
KVVDLLQGQEGFRWKGHTRLDMREEPVLFPPGFQPFALVQCQPPAVVTALTLHSEWKLVA
FGTSHGFGLYDYQQKNNVFVKCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRVSL
RKHHVNNAAKLQDANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTLYFADTFLSDS
SHNTPSLWAGTNGGCVFAYMLRLPAVEHRADEPITAQPAKEIQLMHRAPVVGIVVLDGHG
APLPEPLEVAHDLARSPDMQGSHHLLVISEEQFKVFTLPKVSAKMKLKLTAVDGSRVRRV
GVAWFGSNRSEDYGESGLMVLTNQGDVHVVSLPTVKMQVQYPCIRREDVSGIASCVFTKH
GQGFYLISPSEFERFSLSTRHLVEPRCLVEVPPHSGTSTQNRRPPDGASSAHGDQGQDRE
DAESAARRVMEHALLNDEKVLQEIQKSLEGDQMSLLENNVKSAVA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggcgacatggccaggagtcccagagagatcgactcaaacaggaactc
ttccagttcaacaaggcaatggagcatggtttcccccaccagcccagtgctttgggctac
agtccatccctgcagcttctggccatcggcaaccgctccggggccatcaaactgtatgga
gccccaggcgtggagttcatgggtctacatgatgagaatgctgccgtcacccaggtgcac
ttcctcccccaccaggttgaattggtgactttgctggatgacaacagtctgcacatgtgg
actttaagagcccacaagggactgtcagagctcctggagataggacgcttcatgctancg
ggaccacctggtgctcctccaagtgtgaccagagtgacagcagtgctggcccactcctca
ggggacctgctgctgttgggcacggagggaggacatgtctttgtagttgaagtccccggg
ttcagagagcttgaagagaggaacatcagtctcgaccaagtcgccagcagtgtaccagat
gactacatcggccggaggaatctggaacatgtagaggccttacaggagaacccagtcaac
ccaaaccaggttgttataggttatgggcgaggtcttatggtcatatgggatctggagaaa
cagtgtgccatccagcacatccctgccacacagcaactagagagtgtgtggtggacagag
gatgggagctacattctcagttcacacagtgatggaagttactgtcggtggatggtgggt
ggagaggatgtgaatgaggaggaggagaaatcagacattccttatggacatttcccctgc
aaggccatctctaaaattgttcagttacctacagtagaaggacctccgttcctgctgttc
agtggtggcatgccaagggccagttatggggacagacactgtatcacagtgatccacagt
aaaacacatgtggctctggacttcacctccaggatcattgacttctttgtcatcagagac
ggagacacaggagatcccagtgcacttgtggtcctggtagaggaggagctggtagtgatt
gacctgcagacagaaggctggccggtcattcagacaccgtacctggttcccctccacagc
tcagccatcacctgctcccaccacatctctgccatccccctcaaactgtgggaaagagtc
atcgctgctggagagctgcagaacacacactattcaaaaaagccgtggccgataacagga
ggccagaacctggcctcagatcctccacagagagacctgctgctcacaggacatgaggat
ggcacagtgtgtttctgggatgcatcaggagtctgtctatatcccatgtacaagttaagc
acagctggagtgttccacacagacactgaccccaatgacaacatgaaccaaggcacagaa
ggagagtggccgccattcagaaaggttggctgttttgacccgtacagtgatgacccgagg
cttggcattcagaagatccatctttgtaaatacagtggttatttgactgtggctggtact
gctggacagatcctggtgctggaactgaacgacgaggcagcagagcagaccgtggaggct
aaagttgtggacttgctgcagggccaagaaggattccgctggaagggccacacgcggctg
gatatgcgagaagagccagtgctgtttcctccaggcttccagccctttgcgctggtccag
tgccagcctcctgctgtggtcaccgccctcacactgcactcagagtggaagctggtagct
tttggcaccagccatggttttggcctatatgattaccaacagaagaacaacgtcttcgtc
aagtgtaccttaaaccccagtgaccagcttgccatggagggtcctctgtccagggtaaag
agcataaagaaatctctccgacagtccttcaggagaatcagacgcagcagggtctcacta
aggaaacatcatgtcaacaatgctgcaaagcttcaggatgcaaatgctcgtctggaggct
gagctggcagaaatggagctggctcctgtccagaggaagatcgaggctcgctcctcagac
gactccttcactggtctcgtacggacgctgtactttgctgacaccttcctctcggacagt
tcacacaacacaccctccctatgggcagggacaaatggcggctgtgtgtttgcatacatg
ctccgccttcccgctgtagagcacagagcagacgaacctatcacagcacagccggctaag
gagatccaactaatgcaccgggctcctgttgttggcatagtggtgttggacggtcacggt
gctcctctccctgaacccctggaagtagcacatgacctggctcgctcacctgacatgcag
ggatcacaccaccttctggtcatatctgaggaacagtttaaggttttcaccctgcctaag
gtgagtgctaagatgaagctgaagctgacagccgtggatggctccagagttcggagggta
ggcgttgcctggttcggcagcaaccggtcagaggactatggtgagagtggccttatggtt
ctgaccaatcagggcgacgtccatgtggtgtccctgcccacagtgaagatgcaggttcag
tacccatgcatccgccgtgaggacgtcagcggcatcgcttcttgtgtcttcaccaagcac
ggccagggcttctacctgatctctccatctgagtttgaacggttctctttgtccacccgc
cacctggtggagccacgctgtctggtagaggttcctcctcattcaggcacctccacccaa
aacaggcgaccacctgatggagcttcatctgctcatggggatcaaggacaagaccgtgag
gatgcagaaagcgcagctagacgtgttatggagcatgctttgctgaatgacgagaaagta
cttcaagagatccagaagtcactagaaggagaccagatgtcgttgctggagaataatgtg
aagagtgctgtagcttga
DBGET
integrated database retrieval system
