Lates calcarifer (barramundi perch): 108876865
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Entry
108876865 CDS
T04895
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00603
Glycosphingolipid biosynthesis - globo and isoglobo series
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108876865
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108876865
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
108876865
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
FORS blood group (Forssman antigen)
108876865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Neurensin
Motif
Other DBs
NCBI-GeneID:
108876865
NCBI-ProteinID:
XP_018522177
UniProt:
A0A4W6G158
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Position
LG2:complement(26848600..26857354)
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AA seq
365 aa
AA seq
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MLRYISRTHILVSFAFLLILLGVIYVYSGYTIPSYSLCQQCDDIPEPGVKDILTDVWMNE
CPSSGGWRIGDLKMQAGLKYAQPSTQKGRTDVNAVTNWNVPLVWEGTFDPVVIDAIYKKM
DPRVAVVVFAVGKYTRFLEGFLVSGEKYFLVDFRVTYYIFTDHEKEVPKIKLGKGRNITV
LPIPSATRWQDVVFGRMKWATIAIDKQIRNEADYLFMMDIDSVFHDRFGAESLSHLSVVL
HRGYYKNTKRDQFPYERRPQSKAYIPLGEGDYYYTAAVWGGNLEEMYKLVKYCYMQSEED
AKNKIEAVWQEESHLNKYLLYNKPTKVLSPEYLWSDYDQVPADIKVVRISQLIKNYAEVR
PNGGH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctacatttccagaacccatattttggtcagttttgcctttcttctcattctt
ttgggagtcatctatgtctactcaggatataccatcccatcctacagcctttgccagcaa
tgtgatgatatccctgagccaggggtgaaggacatactgacagatgtatggatgaatgaa
tgccccagcagtggtggctggaggattggagacctaaaaatgcaagctggactgaaatat
gctcagccaagcacacaaaaaggacgcactgatgtgaatgcagtgacaaactggaatgtc
cctctggtttgggagggaacctttgatccagtggttatcgatgccatttataagaaaatg
gacccaagagttgctgtggtggtgtttgctgtgggcaaatatacccgtttcctggagggt
ttcctggtgtcgggtgaaaagtactttcttgttgacttcagggtcacttactacatcttc
acagaccatgaaaaagaagttcccaaaatcaaactgggtaagggccgaaacatcacagta
ctccctatccctagtgccacccgctggcaggatgtagtatttggcaggatgaagtgggcc
accatcgccattgacaaacagatccgtaatgaagcagattatctttttatgatggacatc
gacagtgtcttccatgaccgcttcggagctgagtctctcagccatctgtctgttgtgctt
catcgtggctactacaagaatacaaaaagagatcaatttccatatgagcgtcggccccag
tccaaggcatacattcctcttggtgaaggagactactattacactgctgctgtctggggt
ggaaacctggaggaaatgtacaagctagtcaagtactgttacatgcagtcagaggaggat
gccaagaataagattgaagctgtgtggcaggaagagagtcacctcaacaagtacctgttg
tacaacaaaccaaccaaagtgctgtctccagaatacctgtggtcagactacgatcaggta
ccagcagacatcaaagtggtcagaatctcccagctgattaagaactatgcagaggtgcgg
cccaatggcggacactga
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