Lates calcarifer (barramundi perch): 108876902
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Entry
108876902 CDS
T04895
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108876902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108876902
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
108876902
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
DUF87
AAA_22
Zeta_toxin
AAA_21
OATP
AAA
nSTAND1
RsgA_GTPase
AAA_29
P-loop_TraG
AAA_25
Motif
Other DBs
NCBI-GeneID:
108876902
NCBI-ProteinID:
XP_018522219
UniProt:
A0A4W6G0Z1
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All DBs
Position
LG2:complement(26527252..26537626)
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AA seq
718 aa
AA seq
DB search
MRLLMHMSGCARGVHLSKLRLTRPRMSWLEHRLTLSAAPRRKTQSTGVTSLDHPTRRPFT
PVLPYSPFRGLSVLWTHTSTSIARAPTFTHTPVAFASSSAPSTPPPAEPEKTQTDREKTP
TKISLEDLKRIVGLAHPERWRLAAAVGFLTISSTVTMSAPYFLGKVIDTIYTTTADTESM
TASLTSLCVMLLGVFLCGGAANAARVYLMQISGEQIIRNLRAAVFTSILRQEVAFFDKNR
TGELINRLSSDTAVVGSSITDNLSDGLRAVAQAAAGVSMMFYVSPSLAGFVLLIVPPIAG
LAIGFGRYIRAISKRTQDALAQATQLAEERISNMRTVRAFGKEMSEVNKYTEKADYVFSL
ARKEAALLAGFYGVTGLSGNIMILSVLYKGGLLMASQHMTVGELSSFLMYTFWVGISIAG
LSSFYSQLMKGFGAGSRLWELLDRKPEFPLDEGLELPVDQLKGRLEFSNVSFAYPTRKEA
PIFQNLSLLVPAGTIMAVVGSSGSGKSSLVSLLLRLYDTDAGIITIDGHDIRDLNPYWLR
SHIGTVSQEPVLFSCSIRENISYGAVDPGAVTTEDIYNAARVANAYDFIQAFPKGFDTIV
GEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMEGRTVMI
IAHRLSTIQNANSVAVLDQCRIAECGQPTELLGNREGLFRKLMEKQAFLQEEQKRALL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttaatgcacatgtcaggatgcgcacgcggagtgcatttatcaaaactgagg
ctaacgcggcccaggatgtcatggctggagcaccgcctgaccctctcagctgccccccgc
aggaagacgcagtcgaccggggtcacgtccttagaccatccgacacgcaggcccttcacg
ccggttctgccctacagcccatttaggggtctctctgtgctctggacacacacctccacc
tcgatagcccgagcgcccacattcacacacacacctgttgccttcgccagctcctcagcc
ccctccacacccccaccagccgaaccagagaagacccagacggacagagaaaaaactcca
accaagatctcactggaggatttgaaaaggattgtgggacttgctcacccggagagatgg
agactggcagctgctgtaggcttcctgaccatctccagcacagtgaccatgtctgctcca
tacttcctgggtaaagtgattgacaccatctacacaactacagcagacacagagagcatg
acagcctccctgacatcattgtgtgtcatgctgttgggggtgtttctgtgtggtggtgca
gctaatgccgccagagtctacctcatgcagatctcaggtgagcagattattcgtaatctc
cgtgccgccgtcttcacctccatcctcaggcaggaagtggcattttttgacaagaacagg
actggcgagcttatcaaccgcctctcctctgacacagccgtggtgggcagctcgatcaca
gacaacctgtcagatgggctgagagctgtcgcccaggcagctgctggtgtcagcatgatg
ttctatgtgtcccccagtcttgcaggctttgtgttgttgattgttccccctatagccggt
cttgctataggcttcggaagatacattcgcgccatctccaaacgcacgcaagacgcactt
gcacaagccacacagttggcagaggagcgtatcagcaacatgcggacagtcagggctttt
ggtaaagagatgtcagaggtcaacaaatacacagagaaggcagactatgtctttagcctg
gccaggaaggaagctgcactactagctgggttctatggagtgactggtctcagcggtaac
atcatgatcttgtcagtgctttacaaaggaggccttctcatggccagccagcacatgact
gtgggagagctgtcatcgtttctcatgtacacgttctgggtcggcatcagtatcgcaggt
ctgagttcattctactctcagctgatgaagggttttggagcaggatcccgactgtgggag
ctgctggacagaaagcctgagtttcctcttgatgaaggcctagagctccctgtggaccag
ctgaagggtcggctagagttctccaatgtttcctttgcctacccgacccgtaaggaggct
cctattttccagaacctcagtctgctggtcccagctggtaccatcatggccgtggtagga
tccagtgggtctggaaaatcatccctggtctcgctgctcctcaggctgtatgatactgat
gctggtatcatcactatagatggccatgacatcagggacttaaatccctattggctcagg
agccacattggaaccgtcagccaggagccagtgctgttttcttgttctatcagggagaat
atttcatacggtgctgtggacccaggcgctgtgaccacagaggacatctacaacgcagcc
agagtggccaatgcctatgatttcatccaggcttttcctaagggctttgacaccatagtt
ggagagaaaggagtgctgctgtcaggtggtcagaagcagaggatagcaatagccagggct
ctgctcaagaatcctaagatcctgcttttagacgaggctaccagtgcattggatgctgag
aatgagttcctggtgcaggaggccttggagcgcctgatggaagggaggacagtcatgatc
atcgctcaccgtctctccaccatccagaatgcgaactccgtggctgtactagaccagtgc
cgcatagccgagtgcggccagcccacagagctgctaggcaacagggaaggactgttcaga
aaactgatggagaaacaggcgtttctacaggaagaacagaaacgagccctgctctga
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