Lates calcarifer (barramundi perch): 108876917
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Entry
108876917 CDS
T04895
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108876917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108876917
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108876917
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108876917
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108876917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
TPR_12
zf-MYND
TPR_10
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
108876917
NCBI-ProteinID:
XP_018522252
UniProt:
A0A4W6FW24
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Position
LG2:complement(26135057..26216662)
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AA seq
445 aa
AA seq
DB search
MAPRLERFVSPGKGNGLRATASIRRGELVYSTEPLACCVSNRLARDVCHHCFTRRETLLR
CSHCKMARYCNISCQKQAWSGHKRECKCLRSLLPRIPTDSVRLAARLIFALLSTSKGSSE
ELYTLEEHESHLSSMPEQKKQGLSQLASMLDLYLQQEVLGLAQEMTSALPPSCQEPLSLI
AKVTCNCFTISDGELQEIGVGLYPSLSLLNHDCRPNCVMVFEGTKLQLRAVRDINPEEEL
TISYIETLSLTEDRRRQLEDQYHFMCHCQHCDSQDKDELMLSGDEASWSLLKEALPRLEG
QKAESDWQALLESCSHLLSTIGANVPDDNLYKLRITDVALDASIHLGLWEEAVKYGERTL
PVYRQYYPDPHPVHGVQLMRIGKLQHYLERIEDALDTFKQAYQIIKLTHGDSHPLTTDLL
MKMEECRAEMDQQSSIARRHLSRTP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaggctggagcgttttgtcagcccgggaaaaggtaacggtctacgggcgaca
gccagcatcaggagaggcgagctagtgtactccaccgaaccgctggcatgctgtgtgtcc
aacagactggccagagacgtctgccaccactgcttcacacgacgcgagaccttgttgagg
tgttctcattgtaagatggctcgatactgcaatatctcttgccagaaacaagcatggtct
ggccataagagagagtgtaaatgtctgcggagcttgctacccagaattcccactgactca
gtccgtctggctgcgagactcatctttgccttgttgagtacatctaagggcagtagtgag
gagctctacactttggaggagcatgaatcacacctgagttccatgcctgagcagaagaaa
caaggtctgtctcagctggcctccatgttagacctgtacctgcaacaggaagtgcttggc
cttgcacaggaaatgacatcagcactgcctccctcctgccaagaacccctcagccttatt
gcgaaggtgacatgtaattgtttcaccatcagtgacggagagctgcaagagattggagtt
gggctgtatccgagtctatctctgttaaaccatgactgcaggccaaactgtgtgatggtg
tttgagggaacaaaactacagctcagagctgttcgagatatcaaccctgaagaggagctc
actataagttacattgagacgttgtccctaactgaagatcgacggagacagctggaggac
cagtaccatttcatgtgccactgccagcactgtgactcccaagacaaagatgaactcatg
ctgtctggtgatgaagcatcatggagcctgttgaaggaggctctacccagactggaagga
cagaaagcagagtctgattggcaagcactgctggagagctgtagtcacttattatcaacc
attggtgccaatgtgcctgatgacaatctctacaagctcagaataacagacgtggcttta
gatgcctccattcacctgggactctgggaggaagctgtgaaatatggggagaggaccctt
cctgtatacagacagtactaccctgatccccacccggtccatggagtccaactgatgaga
atcggaaagctgcagcattacctggaacgcatcgaggatgctctggacacattcaaacag
gcctatcaaattataaagctcacccacggagacagtcaccctttgaccactgatctcttg
atgaagatggaagaatgtcgcgctgagatggatcaacagtcatccatcgctcgacgtcat
ctatctcgtacaccttga
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