Lates calcarifer (barramundi perch): 108876966
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Entry
108876966 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: CUGBP Elav-like family member 3-B
KO
K13207
CUG-BP- and ETR3-like factor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108876966
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108876966
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
108876966
NCBI-ProteinID:
XP_050932929
UniProt:
A0AAJ8BJB0
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Position
LG2:complement(22669102..22807078)
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AA seq
492 aa
AA seq
DB search
MATVTANGVQQENGFSTTNSAGRMNGLTIGQNTIPMKDHDAIKLFIGQIPRNLEEKDLKP
LFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKP
ADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSH
AEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPMTIQFGAYG
AYSHAVSLSPAGEETQMMQQQAALMAATQGSYLNPMAAIAAAQMQQMAAFNVNGLVATPM
TPSSGTSTPPGISATAVPSIATPIGVNGFSALPPQSNGQPTSEPIYTNGIHPYPAQSPTV
TDPLQQAYAGVQHYAAAYPAAYAPISQAFPQQPTIIPQQQREGPEGCNLFIYHLPQEFGD
AELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKV
QLKRPKDANRPY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtcactgcaaacggagtgcagcaagagaatggattcagcaccacgaacagc
gccggcaggatgaacgggcttaccatcggccagaacaccattccaatgaaggaccacgac
gccatcaagcttttcatcgggcagattcccagaaacctggaggaaaaagacctgaaaccc
ctgtttgaggaattcggaaagatatacgaactcactgtactgaaagacaggtttacggga
atgcataaaggatgtgcctttctaacatactgtgccagagagtcagcactgaaggcccag
agcgccctccatgaacagaagactctgccagggatgaaccggcccatccaggtgaagcca
gccgacagcgaaggacgaggagaagacaggaagctgtttgtgggaatgctcggcaagcag
cagagtgaggatgacgtccggcggctgttcgagaccttcggccagatcgaggagtgcacc
gtcctgcgagggcctgatggggccagtaagggctgtgcctttgtgaagttttccagccat
gcagaagcgcaggccgccatcaacagcttgcatggtggacagactatgccaggtgcctcg
tccagtctggtggtcaagtttgctgacactgataaggagaggaccctgcgtaggatgcac
cagatggcgggccagctcggcatcttcagtcccatgaccatccagtttggggcctatggc
gcctactctcatgctgtaagtctcagcccggcgggggaggagacgcagatgatgcaacag
caagcagccctgatggcagcgacacaagggtcctacctgaaccccatggcagccatcgct
gccgcgcaaatgcagcaaatggcagctttcaatgtcaacggcctggttgctactcccatg
acaccgtcctcaggcaccagcacacccccaggcatctctgccacagcagtgcccagcata
gccaccccaatcggggtcaacggattcagtgccctcccgcctcaaagcaacgggcagccc
acctctgagcccatctacaccaatggtattcatccttacccagcacagagtccaacggtg
accgaccctctccaacaggcttatgctggcgtccaacactacgcagcagcctaccctgcc
gcctatgcgccaatcagccaagcgttcccccagcaaccaaccatcattccccagcaacag
agggaagggccagaaggttgcaacctgtttatttatcacctgccccaggagttcggagat
gcggagctcatgcaaatgttcctaccttttggcaacgtcatctccgctaaagtctttgtg
gaccgagcgaccaatcagagcaaatgtttcggttttgtgagttttgataacccgtccagt
gctcaagccgctatccaggccatgaacgggtttcagataggcatgaagaggctgaaggtg
cagctaaagcggccaaaggatgccaaccgaccttactga
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