Lates calcarifer (barramundi perch): 108876972
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Entry
108876972 CDS
T04895
Name
(RefSeq) protein unc-13 homolog C isoform X2
KO
K15293
protein unc-13 A/B/C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108876972
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108876972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
FlaC_arch
DUF2205
HSM3_C
DUF7653
Motif
Other DBs
NCBI-GeneID:
108876972
NCBI-ProteinID:
XP_018522355
UniProt:
A0AAJ7PFL5
LinkDB
All DBs
Position
LG2:complement(23650628..23753390)
Genome browser
AA seq
2560 aa
AA seq
DB search
MVSALIKTISSYIEKICKGMFTKKLANPIKKKERSENKEPKLTTDLQAHNLTLSTTLKTT
VKKISKCSSARNISLEDDDGKNDCSSLSPTFSYRVAIANGLPKNSLFLNNNESIFPEVLS
IDSSYSDSLSETKPIRRLDEHKSHTMPVRRNRKSLISLAPSDGSSEGERVERSSLHTLRL
GALRKLRKWKKSQECVSSDSEVSNWRKTLGIRSKSLDRAGRQQKSSTLEPGSSSTGCISQ
TQDVMEMIFKELQGISQIETELSELRGHVNALKSSIDEISSSVEVVQSEIEQLRSGFVQS
RRETRDIHDYIKQISHQANNSTLRFLNVPEERSEKTESLIYKILKDKMGFIDAHKTIKIE
LAHRLGQQRECSNAKPRPIIVIFATTQERDLVLKKCYKLKGTGITVSTDSLTHDGKERKD
KTMSSSQTYESMDIKVSGKDKVVESDDWDSMDSDKELDELSRNKYAMVISKPVHKSKSEK
RRSHDHSRSGEEAGYSGTVHYADDSYYDPDKHAKAYYSDLTPGWLSQSDYSTPKLSRSES
DCSKLCQSYSEDFSESQYFTRANGCSLLSSSDQELWQRKQEDMASSWYASPSHENQTYEH
NEVETTETIDSGVSNGLVCMSGDRSHYSGSQISLQGDLSPWKDWHHLEQGADSGLEASIE
VSSPFDPSTIPGFPENITKCQEVDLQFEGDEEFMMLDREASLPPITTHIIPPITERESVI
KSARQSKEGCKVITKESTKVSSKDVSKTAAKVTHKQSKLAPKEETIKILPKESPKVTAKV
SPKVTSKAVPKESPKEIQKSATKESSQALPKDSPKLTPRDATKPNVKDVSKVTSKVASSE
AAKVTPKVTPKDSPIMTPKESPKESPKDSPKVTPIESPVSTPKESPKDSPKESPKVIAKE
PPQIASKEGLKVAAKEVTKEAAKPPPKEAPKDMPKVVSKETGKVPPKEVSKIPPKETPKV
TPKESPKVTPKDTPKAAAEAPKVAPKVASKDAPKETVNTVPKDKFPELDVNHSFHQTQSK
STTMYRSQSEIRTEKVEEVPKSWSSRLSIDLSEKSFGFGFGSTLQRAKSALEVVWKSGSQ
STPAPPEEPNSSSSFMGRFRTLSTSTANNSSTTIDSDVYTEPVFYKAEEEKTGTEAETSE
QPVDSETHYVEVMEQVLANLENRTNANETEETDEPTQECETSQDYDVSDDIEASQDNASQ
DFEASQDFEATEDYEASKEARVLEYDCSLDEQYDEEYSEDYEAQLTEDTAEYDAMVEYVD
VEEPETEDNDVTEEMEEGDELEDVEDIIEEATEGSEKVEQQQEDENKNVPEEKPTEAPPK
KRVRPTFKEAALRAYRKQMAELEQQILAGDASALDTQPRSLLDPKVLGLQSGGAGSILYG
IDSMPDLRRKRTVPLVRDLAGISFALVNRSTLNNEDLKLHVFKKTLQALIYPISSTTPHN
FEVWTATAPTYCHECEGLLWGIARQGMRCSECGVKCHEKCQDLLNADCLQRAVEKSSKHG
AEDKTQNIIMAMKERMKIREKNRPEVFEVIQEMFHISKEDFSSHLKTAKQAVLDGTSKWS
AKISITVMSAQGLQAKDKTGSSDPYVTVQVGKTKRRTKTIFGNLNPVWDEKFYFECHNAT
DRIKVRVWDEDDDIKSRVKQHFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVS
GAIRLKISVEMKGEENVVPPHGQYTCLHENLFHYLTELKNSGVVKIPQVKGDEAWKVYFD
DVSQEIVDEFAMRYGVESIYQAMTHFSCLSAKYMCPGVPAVMSNLLANINAYFAHTTTTT
TTTASASDRFAASNFGREKFVKLLDQLHNSLRIDLSKYRDNFPAGNPERLQDLKSTVDLL
TSITFFRMKVQELQSPPRASMVVKDCVKACLDSTYKYIFDNCHELYNQLLDQSRKQDIPR
EEQGPSIKNLDFWPKLITLMVSVIDEDRTAYTPVINQFPQELNVGKISAEIMWNLFALDM
KYAMEEHDKHRLCKSTEYMNLHFKVKWFHNEYVRDLPAFKGVPPEYSLWFEPFVIQWLDE
NEDVAMDFLNGALERDKKDGFQQTSEHALFSCSVVDVFTQLNQSFEIIKKLECPNPQALA
HFMCRFAKTINKVLLQYAAIISKDFPQYLNKENVPCIILNNIQQLRVQLEKMFESMGGKQ
EEGVVSFCKLDAEASDLLKELQNKLNTVLDELSGVFGSSFKPVIEDCVKQMNQELVQMKG
PAKGSNAAMDAETVLRPLMDLLDKNLMLFAKICEKTVLKRVLKELWKIVLNTIERTIVLP
PLSDQSGAQMIFSAAKDLGQLSKLKEHVIREEARSLTPRQCAAMDLVLPTIKQYFHAGGN
GLKKTFLEKSPDMKSLKYALSLYTQPTDALIKKYICTQTSQGQSSNGSVGEVSMQVNLIS
HPGTGEHKVSVKVVAVNNLIWQTNAMFRPFVEVSAVGPHLADKKRKFSTKTKNNNWSPKY
NETFQYVLSNEHGPEAYELHVSVKDYCFAREDRIIGMTVIQLRELADKGSCSACYPLVKS
ISMDETGLTIMRILSQRTNDEVAKEFVRLKTDTRSAEEVS
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccctaatcaagactatatcatcctacattgaaaagatttgcaaaggaatg
tttacaaagaaattggcaaacccaataaagaagaaagagagaagcgaaaataaagagcct
aaattgaccactgatttgcaagcacacaatctaacactctctaccacactgaagactaca
gtgaaaaagatttccaaatgctcttcggcacgtaacatatcacttgaggacgacgacgga
aagaacgactgctcatcactgtcacctactttcagttatcgtgtagctatagcaaatgga
ctcccaaaaaactctctttttttgaataataatgaaagcatctttcctgaggttctttca
attgatagcagttactctgactccttgagtgagacaaaacctatccggagactggatgag
cataaatcacacacaatgccagtaagacgaaacagaaagagcctcatcagtttggctccc
tctgatggcagttctgagggtgagcgagtggaacgctccagtctacacacacttaggctg
ggtgctctacgcaagttgagaaaatggaaaaagagtcaggaatgtgtctcctcagactct
gaggtaagcaattggaggaaaaccctgggcatccggagcaagtccttggaccgtgctgga
cggcagcaaaaaagttcaaccctggagcctggctcctcctccacaggttgcatcagtcag
acccaggatgtcatggagatgatctttaaagagcttcaagggatcagccagatagagaca
gaactgtctgagctgcgtggccatgtaaatgccctaaaaagctccattgatgagatctcc
agtagtgtggaagtcgttcagagtgagattgagcagcttcgctcaggatttgtccagtca
agaagggaaacacgtgatatccatgactacataaaacagattagccaccaggccaataac
tcaaccttgcggttcctcaatgttcctgaagagaggtcagagaaaacagagagtctaata
tataaaatactaaaagataaaatgggtttcattgatgcccataaaacaataaaaattgag
cttgctcataggcttgggcaacaaagagaatgttctaatgcaaaaccccgccctattatt
gtcatttttgcaacaacccaagagagggatttagtcttgaaaaaatgctacaaacttaaa
ggaacgggcattacagtctctactgatagcttaactcatgatggaaaggagagaaaagac
aaaacaatgtcttcctcacaaacctatgaaagcatggatataaaggtctcaggaaaggat
aaagtagtggagagtgatgactgggactcaatggacagtgacaaagaattagatgaatta
agcagaaataaatatgcaatggtgatttcaaagcctgttcacaagagcaaatcagagaag
aggagatcccatgaccatagccggtcaggggaggaagcaggctactcaggcacagttcac
tatgctgatgactcttactatgacccagacaagcatgcaaaggcttactactctgatttg
acccctggttggctttcccagagcgactattccactcctaaacttagccgctctgagtct
gactgctcaaaactttgccagtcatactccgaagacttttcagagagccagtactttaca
cgggctaatggctgctccctgctgtcctcctcagatcaggaactgtggcagagaaaacaa
gaagacatggcctcctcctggtatgctagccccagccatgaaaatcaaacctatgaacac
aatgaggttgagacaacagaaactattgatagtggggtgagcaatggacttgtatgcatg
tctggggatagaagccactacagtggctcccagatctctctgcaaggtgatttatcaccc
tggaaagactggcatcatctggagcagggtgctgactctggcttggaagcttccatagag
gtcagcagtccctttgacccatcaaccatcccaggttttccggaaaacatcactaaatgt
caggaagttgatttacaatttgaaggagatgaagaattcatgatgcttgacagagaagct
tctctaccacctataaccacacacatcattcctcccatcacagaacgggagtctgtcatc
aagtctgctcggcagtctaaagagggatgtaaggtgatcacaaaagaaagcacgaaagta
tcatctaaagatgtgtctaaaactgctgctaaagtgacacataaacaatctaaattggct
cctaaagaagaaaccatcaaaatattgccaaaggaaagtcccaaggtaactgctaaggtt
tcacctaaagtgacctctaaagcagttcctaaagagtcacctaaagagattcagaaatca
gcaactaaagaatcatctcaagctctccctaaagacagtcctaaactaacacctagagat
gccacaaagcccaatgttaaagatgtttctaaagtaacatccaaggtagcctctagtgag
gctgctaaagtcactcctaaagtgaccccaaaagatagcccgataatgactcctaaagaa
agtcctaaagagtcacctaaagacagccctaaagtaaccccaattgagagccctgtatca
acccctaaagaatcccccaaagattcccctaaagagtcccctaaagtcattgcaaaagag
ccaccacaaattgcatctaaagagggtctgaaagttgctgctaaagaggttaccaaagaa
gctgcaaaaccgccaccaaaagaggccccaaaagacatgccgaaagtagtatctaaggag
acaggtaaagtcccccctaaagaagtttctaaaattccacctaaagaaaccccaaaggta
acccctaaagagagtcctaaggtgaccccaaaagacacccctaaagcagctgcagaagcc
cctaaggtagcacccaaagtagcttctaaagatgcccctaaggaaacagtaaacacagtt
cctaaagacaaattccctgaactggatgtcaatcatagctttcaccagacccagagtaag
tctacaactatgtaccgcagtcagagtgagattcgaacagagaaggttgaagaggttccc
aagtcttggagcagtaggctcagcatagatctcagtgagaagtcctttggttttggcttt
ggctctacactgcagagggctaagtcagctctggaggttgtttggaagtctggctctcag
agtacccctgcacctcctgaggagcccaactcctcttcatcattcatggggcgttttcgc
accctgtccacctccactgcaaataactctagtactacaatagactcagatgtctacact
gagcctgtcttctacaaggcagaggaagagaaaaccggtacagaagcagagactagtgaa
caaccagtggacagtgagacccactatgttgaagtgatggagcaggtactagctaacttg
gagaacaggactaatgctaatgagacagaggaaacagatgagcctacacaggagtgtgag
acttctcaggactatgatgtgtctgatgatattgaggcatctcaagacaatgcctctcag
gattttgaggcctctcaagattttgaagctacagaggactatgaggcaagtaaagaggca
cgagttctggagtatgattgcagtttggatgagcagtatgatgaagagtacagtgaggac
tatgaagctcaactcactgaagacactgctgagtatgacgcgatggtggagtatgtagat
gtagaagaaccagagactgaggacaatgatgtgacagaggagatggaagagggtgatgaa
ttagaggatgtagaggatataatagaagaggctactgaggggtctgaaaaagtggaacaa
cagcaagaggatgaaaacaaaaatgttccagaggagaagcccacagaggccccacccaag
aagcgtgttcgacccacattcaaggaagcagcactcagggcctacaggaaacagatggct
gaactggagcagcagatcctggcaggggacgccagtgctttggatactcagcctcgcagt
cttttggatcccaaagtgctcggcttgcagtctggaggggctggcagtattctttatggt
attgacagcatgccagatttacgccgcaagaggacagtgcctcttgtccgagacctggca
ggcatctcgttcgctctggtgaaccggtccaccctgaataatgaggacctgaaactgcat
gtcttcaagaagaccctccaggccttgatttacccaatttcatccacaacaccccataac
ttcgaggtgtggacggcgaccgcacctacctactgccatgagtgtgaggggctgctgtgg
ggcattgcccgtcagggcatgcgctgctcagagtgtggcgttaaatgccatgagaagtgc
caggacctgctcaatgcagattgtttacaaagggctgtggagaaaagctccaagcacggg
gcggaggacaagacccagaatattataatggctatgaaggaacgcatgaagataagggag
aagaatcgtcctgaagtgtttgaggtgatccaggagatgttccacatctccaaggaagac
ttcagcagccacctcaagacagctaagcaggctgtgcttgatgggacctccaagtggtct
gccaaaatcagcatcacagtcatgagtgcacagggcttacaggccaaggataaaactggc
tccagcgacccttacgtcaccgtccaagtgggcaagaccaaacgcaggacgaagaccatc
tttggcaacctcaatccagtctgggatgagaagttctactttgaatgtcacaacgccact
gaccgaatcaaagtgcgtgtgtgggacgaagacgatgacatcaaatcacgggtgaagcag
cacttcaagcgcgagtcagatgacttcctgggccagaccatcatcgaggttcgcactctc
agtggagagatggatgtttggtacaatctagataagagaacagacaagtctgctgtatct
ggtgccattagactcaagatcagcgtggagatgaaaggggaggagaatgtggttcctcct
catggccagtacacctgtttacatgagaacctgttccactacctgaccgagttgaagaac
agcggggtggtaaagatcccgcaggtgaaaggggacgaggcgtggaaggtctactttgac
gacgtgtcccaagagatagtggatgagtttgccatgagatacggagtggagtccatctat
caggctatgacgcatttctcctgtctgtccgccaaatacatgtgtcctggtgtgccagca
gtgatgagcaacctgcttgctaatatcaatgcctacttcgcccacaccaccaccaccacc
acaaccactgcctccgcttctgaccgatttgctgcctctaactttggaagggagaaattt
gtcaaattactggatcaactgcataactcgctaaggatcgatctctctaaatatcgggat
aatttccctgcaggaaacccagagcgactccaagatctgaagtccactgttgatctgctg
accagcataaccttcttcagaatgaaggtgcaagagctccagagtccaccaagagccagt
atggtggtgaaagactgcgtcaaagcgtgcctggactccacgtataaatacatttttgat
aactgtcacgaactatacaatcaactcctcgaccagagccgaaagcaggacattccacgt
gaggagcagggtccatcgataaagaacctggacttctggccaaaactcatcactctgatg
gtgtctgtaatcgatgaggaccggacagcttacaccccagtcataaaccagtttccacag
gagctgaatgtgggcaagatcagcgctgagatcatgtggaacctctttgccctggatatg
aagtatgcaatggaagagcatgacaagcaccgcctatgcaaaagtactgaatacatgaat
cttcacttcaaagtcaaatggttccataatgagtatgtccgtgacctgccggccttcaag
ggtgtcccacctgagtattctctgtggttcgagccatttgttattcagtggctcgacgag
aacgaggacgttgccatggatttcctgaatggagcgctggaaagggacaagaaagatgga
tttcagcaaacctcggagcacgccctcttctcttgttctgtggtggatgtgtttacccaa
ctaaaccagagttttgagattatcaagaagctggagtgtccaaacccacaggctctggct
cacttcatgtgccgctttgcaaagactatcaacaaagttcttctgcagtatgctgcaatc
atatccaaggactttcctcagtatttgaataaggagaacgtgccctgtatcatcctcaac
aatattcagcagctccgtgtccaactggagaagatgtttgagtccatgggagggaaacag
gaggagggggttgtgtccttctgtaagctggatgcagaggccagtgatctgctaaaggag
ctgcagaataaactcaacacagtgctggatgagctcagcggagtgttcggctccagtttc
aaacctgtgatcgaggactgcgtgaagcagatgaaccaggagctggtccagatgaaaggt
ccggccaaagggagcaacgctgccatggatgcagagactgtcctccggcctcttatggat
cttctggataaaaatttgatgttatttgccaagatttgcgagaagacagtgttgaaacga
gtcctcaaagagctatggaaaattgtgctgaacaccatcgagagaacaattgttctgcct
ccgctgagcgaccagagtggagctcagatgatcttcagtgctgccaaggacttaggacag
ctgtcgaaactgaaggagcatgtaattcgagaggaagccagaagtctgactccacgccag
tgtgcagccatggaccttgtgctccccaccatcaagcaatacttccatgctggaggaaac
gggctgaagaaaaccttcctcgaaaagagccctgacatgaagtccctcaaatatgctctc
agcctttacactcaacctacagatgccttgatcaagaaatatatatgcacccaaacctct
caaggtcagtcatccaacggatcggtgggggaggtgtcgatgcaagtgaatctcatctct
caccctggcactggagagcacaaagtcagcgtgaaggtggtcgcagtgaacaacctcatc
tggcagaccaatgccatgttccgtccgtttgtagaggtcagcgccgtgggaccacacctg
gctgacaagaagcgcaaattcagcaccaagaccaagaataacaattggtcaccaaagtat
aatgaaacattccagtatgttctgagtaatgaacatggtccagaggcctacgagctgcac
gtctcagtcaaggactactgctttgcccgcgaggaccgcatcatcggcatgacagtcatc
cagctccgagagctggcggacaagggcagctgctctgcctgctacccgctggtgaaaagc
atctccatggacgaaacgggcctcaccatcatgaggatactctctcaaaggaccaacgac
gaggtggccaaagagtttgtgcgtctcaagacagacacacgctcagcggaggaagtgtcg
taa
DBGET
integrated database retrieval system
