Lates calcarifer (barramundi perch): 108876983
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Entry
108876983 CDS
T04895
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108876983 (irx6a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108876983 (irx6a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
UIM
Motif
Other DBs
NCBI-GeneID:
108876983
NCBI-ProteinID:
XP_018522373
UniProt:
A0A4W6EFA2
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Position
LG2:22461603..22467141
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AA seq
508 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGGSQTAAAAASFCCP
SYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSTLNPQYDIKD
STGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLYEHR
KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKASDDRKDDIKSD
QDCVTKDSSDCKEEKDLHLSDLEDMDEDDCDKLDSDCEKVAADEQDLQRAIAVSGAPQKR
DCSSELQLSLTNSFHAFPCAIKSVTTLPPLPSDFLDPVASKAPSSTGPAVGGTVSLSHFE
TSDKPRIWSLARTAASGVILSPQQHGSELRTGNLTGDCQLQSTRLTGAPAGQCGGMRSLH
ENSSVTNAESPFSEGSSLHSKVYGTGSYSHKGLQLHCSSYAALPDTCQYSTIDGFSNGKA
ETQSSDLSEACGTVQDDKVTAFRPVMKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcaatttggatacccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacaggcggctcccagaccgccgccgccgctgcctcattctgctgcccg
tcctacgagaaccggctcctggcgagcagccggacggaactgaacgcagcgctggggatg
tacagctctccctacgctgcagcggccgccgcaagccagaactacgccaactacttcccc
tacagcaccgacccatcggctatctactccactctgaatccacagtatgacattaaggat
agcacaggcactttacactctggcatcactcagaccgctgcatactacccttatgaccac
tcactgggacaatatcaatatgacagatatgggacggtagactttaatggcacagccaga
agaaagaacgcaactcgtgaaaccaccagcaccctgaaaacatggctgtacgagcaccgc
aagaacccctaccccaccaagggagaaaagatcatgctggccatcatcaccaaaatgacc
ctcactcaagtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaacaag
atgacctggtcaccaaagaacaaggccagtgatgataggaaggatgacatcaagagtgac
caagactgtgtcaccaaagattctagtgattgcaaggaggaaaaggatctgcatctgagt
gacctggaggacatggatgaggacgactgtgacaagctggacagtgactgtgaaaaggtg
gcagcagatgagcaggacctccagagggccatagcagtatccggagctcctcaaaaaaga
gactgcagctctgagctgcaactgagtttaactaacagcttccacgcgttcccctgtgcc
attaaaagtgtcaccaccctccctcctctcccgtctgacttcctggatcccgtagcgtcc
aaggcaccttcctcgaccggccctgcagtgggaggaacggtgtccctgtctcactttgaa
acatcagataagccacggatttggtcgctggctcgcacggcggcttcgggggtcatactg
agccctcagcagcacggctctgagctgaggacaggcaacttgaccggggactgccagctc
cagagcaccaggcttaccggggctcctgctggacagtgtgggggcatgagaagtctccat
gaaaacagcagtgtcaccaatgctgagagccccttctctgagggctcatccttgcactca
aaagtctacggcactggcagctacagccacaagggcctccaactgcactgttcatcctat
gctgcactcccggacacatgtcagtactccaccattgatggattctccaatgggaaagca
gagacacagtcatcggacctgagtgaagcttgtgggaccgtgcaggatgacaaggtcact
gcattcagaccggtgatgaagaggtga
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