Lates calcarifer (barramundi perch): 108876992
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Entry
108876992 CDS
T04895
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04217
Necroptosis
lcf04622
RIG-I-like receptor signaling pathway
lcf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108876992 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108876992 (cylda)
04625 C-type lectin receptor signaling pathway
108876992 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108876992 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108876992 (cylda)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108876992 (cylda)
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C67
108876992 (cylda)
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108876992 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
108876992
NCBI-ProteinID:
XP_018522392
UniProt:
A0AAJ7LFU6
LinkDB
All DBs
Position
LG2:21364420..21385907
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AA seq
956 aa
AA seq
DB search
MSSVLWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVQELDEKLAELLFPITNCEERYALLCNKSRLTRVCD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELCEDDDDEALGELEVDHVNLVEEDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPAASLSSDNKFHSLPFSL
NRRTGPIDSMSHGPLSLSVQSVMGEQPEPSSPAAPPSPRPPTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHGKLSV
PKELQEGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtcctgtggagccaggagaagcccagtgggggcttccgggaggactggcgc
ttctacatggtcgtgaaggagtgtacggtggagaagcctccccagaagaccctgaggatc
ccccgtggcagtcttggccaggcctgtcaggaacgcaacagcttggggcgaacactgccc
ccgtgcaaaggcaagaaaagtctccgcattctggaccagaccaatgtggtgctgagcctg
gacgagcgggatgtccaggagctggacgagaagctggctgagctgctgttccccatcacc
aactgtgaggagagatatgccctgctctgcaacaagtcacggctaacacgcgtctgcgat
attgactgtggttccaaggtgcgagttcagttgcgctcaggggatgaacctctgcctggt
gtggtccgcttcaagggctcgctgctccctgacagggccctctctggaatctggtttgga
gtggagcttctggaggagggccggggccaaggcttcacagagggttcctaccagggccgt
caacttttccgctgtgaggatgaatgcggtgtgttcgtggccttggacaaacttgaactc
tgtgaggatgatgatgatgaagccttgggcgagctggaggtggaccatgtcaatctagtg
gaggaggaccaggacttccctccactggagatcaactccagggttctggtgcagaccagg
gatggacctgagagaggcaccatcattttttgtgacctgctgccagggaatgagagcctg
ggctactatgtgggagttgacatggacaatcctattggggactgggatggtgtgattgac
gggaagctgctgtgtaattttgccagtttggagcacactcgacttgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatcccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cctgccaagtcacttactgacacgccccctgacttcaaccaatcctccccaccatccaga
gccccgcccgctgcctcgttgtccagtgacaacaagttccactctttgcccttcagcctg
aaccggaggacggggcccattgacagcatgagtcatgggcctctctccctgtccgtccag
tcggtgatgggagagcagcctgagccctcgtcgcctgctgcacctccctcgccgcgacct
ccgacacctccccgtgggcagccaggcctggaggtgggctctctggtggaggtgaaggag
aacccccctctgtgcggtgtcatccgctgggtgggcctgcctcctggcctgctggagcct
ctggctgggctagagctggaagaagagtgtcctggttgcactgatggtaccttcaaaggc
acacggtatttcacctgcccacctaaaaaagccctgtttgtgaagctcaagtgctgccgg
cccgactcccgcttcccatccctgcaccactcctccaatcccatagagaggtgcaactcc
attgcattcgggggttacctgagtgaggtggtacatgaaaacacgccaccacgcacagaa
aacgatggtctagatgtcatggtgggaaaaaagaaaggcatccagggccactacaactct
tgctacctggattcaactctcttctgtctcttctccttcagttctgtactggacactgtt
ctgctgagaccacgatcaaagactgacgtagagtattacagagagacccaagaactgtta
cgcacagagatagtcaaccccctgcgcatacatgggtatgtatgtgcaactaaagtgatg
aagctcaggaggatcttggagaaagtagaagcagcctctgggtttacctctgaagaaaaa
gatcctgaagagttcctcaatatccttttccatcacatacttagagtggatccactgctc
aagctgaggtcagcaggacagaaggtccaggactgttacttttaccagatcttcatggac
aagaaggacaaagttggagttcccaccatccaacagctcttggagtggtccttcatcaac
agtgacttaaagtttgcagaggctccatcctgccttatcatccagatgccccgttttggc
aaggactttaaaatgttcaacaagattttcccctcactagagttagacatcacagacctc
cttgaagacactccaagggagtgtcgaatctgcggaggcctggctctctatgagtgtcga
gactgttatgaggacggggacatcaccgctggcaagattaaacagttttgtgaaaagtgc
aatacacaggttcacctccacccgaggaggaaagcccatcggcacggcaaactgtctgtc
cccaaggagctacaggaaggcacggggcggcagggcagttttccccgtcagaggatggag
ctgttcgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtcaagtatggaagc
gcagattccgcctggctcttcttcgacagcatggcggaccgcgatggagggcagaatggt
ttcaacatcccccaggtgtctccctgtccggaggtggaggcctacctgaaaatgacccca
gaggagttgcatgctctggatcctaagagcatccagggccaggcccgacgcctgctgtgt
gacgcctacatgtgcatgtaccagagcccaaccatgagcctgtacaagtag
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