Lates calcarifer (barramundi perch): 108877002
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Entry
108877002 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 Q1
KO
K10582
ubiquitin-conjugating enzyme E2 Q [EC:
2.3.2.23
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108877002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108877002
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
108877002
Ubiquitin system [BR:
lcf04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
108877002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
RWD
DUF6449
Motif
Other DBs
NCBI-GeneID:
108877002
NCBI-ProteinID:
XP_018522409
UniProt:
A0AAJ7LFV0
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Position
LG2:23092854..23106491
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AA seq
373 aa
AA seq
DB search
MSVSGLKAELKFLESIFDPNHERFRIIDWKPDELSCQFNVTGEKLLIIHCNITESYPSTP
PIWFVDSDDPSLAQVLERLEDVRKGSTLLLQQLKKLICDLCRLYNLPQHPDVEMLDQPLP
AGPVGQDRKHGTEEVTSEEEEEEEMGEDIEDLDHYEMKEEEPVDGKKSEDDGIEKENLAI
LEKIRKNQRQDHLNGAVSGSVQASDRLMKELREIYRSQSYKTGIYSVELVNDSLYEWHVK
LRTVDPDSPLHSDLQVLKEKEGMDYILLNFSYKDNFPFDPPFVRVVSPVLSGGYVLGGGA
LCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYKSLVQIH
EKNGWYTPPKEDG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcggggctgaaggccgaactgaagtttttggagtccatttttgatccaaac
cacgaacgtttcaggatcattgactggaagcctgacgagctgagctgccagtttaatgta
actggggaaaagctgttaattatccactgtaatataacggaatcttatccatctacgccg
ccaatatggtttgtggactctgatgacccgagcttggcgcaagttttggagaggttggaa
gatgtgagaaaaggcagtaccctgcttttgcagcagttgaagaaactcatttgtgacctt
tgccggctgtacaaccttccccaacatcccgatgtggagatgcttgaccagcccctgcct
gcaggccctgtgggacaagaccgaaagcatgggacagaagaggtcacatctgaagaagag
gaggaggaggagatgggagaggacatagaggatctggaccactatgaaatgaaagaggag
gagcctgtggatgggaaaaaatcagaggatgatggcatcgagaaggagaatctggccatc
ctggagaagatccgaaagaatcagaggcaggaccacttgaatggagctgtgtctggttca
gttcaagcttctgaccgcctgatgaaggagcttagagagatctacaggtctcagagttac
aagacaggcatctactcagttgagcttgttaacgacagcctgtatgaatggcacgtcaaa
ctaaggacggtggatccagatagccccttacacagtgatttacaagtcctaaaggaaaag
gaaggaatggattacattttactaaacttctcatataaagataatttcccctttgatcca
ccctttgtccgggtagtttcgcctgtgctttctggaggttatgttctcggaggaggtgcc
ctgtgcatggaacttctcaccaaacagggttggagcagtgcctattccattgagtctgtc
atcatgcagatcaatgccactttagtcaaaggaaaagccagagtgcagtttggagccaat
aaaaaccagtacaatcttgccagagcacagcagtcctacaaatccctggttcagatccat
gaaaagaacggctggtacacaccccctaaggaggatggctaa
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