Lates calcarifer (barramundi perch): 108877003
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Entry
108877003 CDS
T04895
Name
(RefSeq) centromere protein F
KO
K11499
centromere protein F
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108877003
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
108877003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_N
CENP-F_leu_zip
CENP-F_C_Rb_bdg
ATG16
GAS
Fez1
Motif
Other DBs
NCBI-GeneID:
108877003
NCBI-ProteinID:
XP_018522411
UniProt:
A0AAJ7LFV3
LinkDB
All DBs
Position
LG2:26625561..26643198
Genome browser
AA seq
2848 aa
AA seq
DB search
MSWAVEEWKDGLPGKALQKIQEMEVQLDKLKKERTQKQFQLDSLEAALQKQKQKVDSERT
ETSALKRENQCLLESCDSLEKARQKAVHDLGVKEQQVSYLEGQLNSCRKTIERLEQELKK
YKNELDRSQPAGSSSLSSSSAELQPYTTPQKCFSTPAPVPAYRQQDNKLEELQEKYSQEV
EERKRLETELKVLQVKMLNQSSVSISHKDIAARQAGSSIFPWQQQDQAHSRQSLDAMETP
LKRRGTSLWDAHEETPIKPSQRMSCSRAVQSPSGSSQQMEQLKTLNQELRGRVSELERNL
SNQEKEIRNQASKLQDLQTQLNQARKDLAERDRDLAKTSHELSQATDRHQQVEAKCSAVE
QKLKQVTEEMSCQRHNAESCKRALEQKLKDQERDNQKELAQLQSSHKALDQQLNQTRTKL
TQEVQQSKKDYNILQADMEKMCFQKSQMEKEVEEQKQKLLRSEQSLQASQTKEQDLRKKM
EELQKEKNTLTVQLDQSSRRLSQLEEEKKSTDQNLKRTQGQLDDLKAKSEGQVEELKRLQ
SKLEQQTQASARELENLRKTLSDAETKNDRSHNDLQKQKQETERLTNRLTVQEKESQELK
ANLTVSQNECKELKQEHQALLEWKKEKETLINETEAVQKELKDRISNLENSLRSLNEAND
ELKKQLTSVEGDKASLSAHIDSLKGELLNKSTELEEKEHQVKELQSQLSEAGQKHTKDLE
NVVVQVAQLEAQVKDLELRLQKEISRAEQAERTNTELQDEHQAARDLVRSKDQLLELGQA
EISQLRESLTQSTAQQEEQNARLAEEKAALLKQCEESISAKVEETEQIMLQFEEAQQELL
LTKNQVTSTEQFLKVQEQLGAEQQKQIKILSDNEEEHKKMYEKKSEELKLLEEELRAQQG
QTEEKEKQLREAEAQIFSVEKQKAELENVVQETKKEAEILQHVQTERINSLLEQISSLEE
IVSVNKDAAEKLPVLKNELDVVNQSHADLKKSLEALEKSHSSTIETKSNLENTLTEKINQ
VSALEKEVKELTEKMNKESESHALEVENFLNKENNLKEQLEAAKQSVTAAKAELRSRREE
IKTMKTTLSAASRGLEERDNTIKCLKEKLNKAEAEQAKTSDLLKEKVVAMNKIKVQLEML
QMDLEDNESAMNSFDGQVEELRGTIELLEAQLAHNQTQMAEMEARLEDSKTQVSVLESRL
EEVQSQNSVLETQYVTAKEELFERSCEITRLEEDAAKRIQLEESVVALESKLSQIIEESM
KLEATLRQVTEEKDRNLNQFLQEKNSLETTLKQLTDDKEQVENEIIQVNAERKRLEASLD
KLTEENKQLQSNIRQVTEEKQQTEAKIEQMTAEKLEAESVVSQTAEQRVQLDVTLNLINE
EKIQLEAKLSELTSEKNDFVTKLNQAVEEKLQLEMNYNQLTEENTQLQSSVNLVTEEKLQ
LQENIDRHEYEVTSLKEENECIQCLLQASEQEQQRLKEQLEMMDKRTEEENTERGHQFEA
EQAQLHQNLASLQKELTVFKQQYESLLEQVGQQHSLIQQLSGSQSHMETETGISPAEGAE
QIDVEPTIDSSANTESFAEKGQLSPMLSELGTPSYQSDEAFCETELVFKEDIIEQEMIQE
QMEEERQARMADVEEMRSKDEEKLHHTEPLDQVPGDSSSTRDVLENEPEVYEISQPLSSS
SETIELKSCVEELNATDSSQGQDDLTHSNEMITKQENELQTLRSEFDLLSSELALRKELT
SELEVQVQNLEKKVHTAEEAAHGAAQKMNVALQERKDLADQLVQLSEERETLTLQLQTAK
CQLADVIEMLEGLEMAKGGWDEKFLQQESELKRVRSEKANLEQHILGMESELETLQEERT
RLKDETETQKRTCSGMEQQIETLRTETSQLRSELVSCSEERDELSQSLGQWREKVHSLEK
TNCDTRNLISILEDDIRAGRKEYEALQGNMEKLQTERQQLVEQIKAQEQAISQQSGEREE
LIGHLNQIKEDHTSANQNTESMVSKIQALEGEVCRLSQSLESSLLEKGEIASRLNSTQDE
VQEMRTGIEKLQVRIESDERKKRKMGELLKAAQRKSDSLQDRIDALEREKEDVEQSLEEA
VLEAETAKAELEEERRKVEDEKQRLSEKLSELSATLENLRSEKERMERELEAKNREIEEL
KAAKEQLERGLEKAEVDRRQEEERQKYRVEELEKGMREEAQRQIRQVEELHAQLEASRQR
EISLERKGAETEGEKDRVQSLLVKMEKEKQHLQTSLEEWQTEGERLRSKGDELEKERNNL
KTHIEGLEEEIKELKMLIKAKEEEREVLEKDREEEAVQRQASVKSISSLMAEKEQIEREN
GRLVEEKEKLQSTLMSVEEERDDLRLTLASVEEEKERLGREREVFADEKEKLSMIETEKH
DLEQTLSSLKQEKERIEEEKHRLEAEKEELQSSLSLIKVEKEKMCSALSALEKEKQRAEE
EKEKLTEERESLQSTVASMEKELEAQKSSVAQFNEQVSELASRATRLSKERDSALSKMNL
WMKTCKQLEQEKEKMLNSSGDGKSSGEEQTEVNQLRMEEKTKEVEEIKAALDAKRKELEE
RNKELEEMKSELNEVNKLLEEKSTEADESMDKYCSLMVQVHKLEETNNALTARLEQITAS
QRVNEANSSSAVGALCRRSGRKSSSKQQEEKTVDNTENVAPSTPQRSPQGSSSGKRGHRD
ISDKDSAQEALHNLTKKIKANAATPKPTTEQEDEEFRPEGLPELVQRGFADIPLGEASPF
IMRRTTVRRCSPRLAARQTDPTSAPDSKFLAPIAFQSPSAEGSNRKCLSPSGEEKSVGRS
RSVGKTPEQKEKQLLREQTQQADNCHVQ
NT seq
8547 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggcggtggaggagtggaaggatgggcttccagggaaagccctgcagaagatc
caggagatggaagtccagctggataaactgaagaaggaaaggacccaaaaacagtttcag
ctggactccctggaggctgccctgcaaaagcagaaacagaaggtggacagtgaacgtaca
gagacctctgctttgaaaagagagaaccagtgtttactggagtcatgtgactctctggag
aaagcccgtcagaaggctgtccatgacctcggagtcaaagagcagcaggtgagctacctg
gagggtcagcttaactcctgcaggaagaccatagaacgactggagcaggagctcaagaag
tacaaaaatgaattggaccgttctcagcctgctgggtcttcctccttgtcatcctcctcc
gctgagctccagccttacactactccacagaaatgtttttctaccccagctcctgtccca
gcctacagacagcaggataacaaactagaggagcttcaggagaaatacagccaggaggta
gaagaaagaaaaaggctggagactgaactcaaagtcttacaggtcaaaatgttgaatcag
tcatcagtcagtataagccacaaggacattgctgcccgccaagctggatcttccatattc
ccatggcaacagcaagatcaagctcacagccgtcagtctctggatgccatggaaacgcct
ctgaagaggcgggggacatccctgtgggacgcccacgaggaaacacccatcaaacccagc
cagagaatgagctgttccagagcagtgcagagtcccagcggctcctcccaacagatggag
cagctgaagacgctcaatcaagagctgcgtggccgtgtgtcagagctggagaggaatctg
tccaatcaggagaaggaaatccgtaaccaggcctccaagctgcaggatctacaaacccaa
ctgaaccaggcccgcaaagacctggctgaacgggacagagacctagccaagacaagtcat
gagctgagtcaggccacagacagacaccagcaggtggaggccaagtgttccgcagttgag
cagaagctgaagcaagtcacagaggagatgagctgtcagaggcacaatgctgaaagctgc
aaacgagcattggaacagaaactcaaggaccaagagagagataatcagaaggagttagcc
cagctgcagagttcccacaaggctctagatcaacagctgaaccagaccagaaccaaacta
acacaagaggtgcaacagtccaaaaaagactacaacatactgcaggctgacatggagaag
atgtgcttccagaagagtcagatggagaaggaggtggaggagcagaaacagaaactactg
aggtcagagcaaagcctccaggccagccagaccaaagagcaagatctccgcaagaaaatg
gaggagctgcagaaagagaagaacactctgactgtccagttagaccaaagcagcaggcgt
ctgtcccagctggaggaggagaagaagagtacagaccagaacctaaaacgcacccaggga
caactagatgacctcaaagctaagtcagagggacaggttgaagagctgaagagacttcag
tcaaaactagaacagcagactcaggcttcagcccgagagttggaaaacttgaggaagaca
ctttctgatgcagaaaccaaaaatgacagatctcacaatgacctgcagaaacagaaacag
gagacagagaggctgaccaacaggctgacagtacaagagaaggaaagccaagagctgaaa
gccaatctcactgtgagtcagaatgagtgtaaggaactgaagcaagaacatcaagctcta
ctggagtggaagaaagagaaggagaccctgataaatgaaactgaagctgtgcaaaaggag
ctcaaagacagaattagcaacttggagaacagtctccgctcactgaatgaggctaatgat
gaacttaagaagcagctcacaagtgtagagggagataaggccagtctgtcggctcacatc
gattccctgaagggagaactcctcaacaagagcacagagttggaggagaaggagcaccag
gtcaaggagctccagtctcaactctctgaggctggacagaagcacaccaaagaccttgag
aacgttgttgtgcaagtagcacagctcgaagctcaggtcaaagatctggagttgaggttg
caaaaggaaataagtcgagcagagcaagctgagaggacaaacacagagctgcaggacgag
caccaggcagcccgcgacctggtccgctccaaagaccagctgctggagctgggccaggct
gagatcagtcagctgagagagagcctcacacagtccactgcacagcaggaggagcaaaat
gccaggctggcagaggagaaggcagccctgctgaagcagtgtgaggagagtatttcagca
aaggttgaggagacagagcagattatgctgcagtttgaggaggctcagcaagagctgctg
ctcaccaaaaaccaggtcacttccactgagcagttcctgaaggttcaggagcaactggga
gctgagcagcagaaacaaattaagatactgtcagacaatgaagaggaacacaaaaagatg
tatgagaaaaaatcagaggagcttaaactgttagaagaggagctgagggctcagcagggc
cagacagaagagaaggagaagcagctcagagaggctgaagctcagattttctctgtggag
aaacaaaaggctgaactggaaaatgttgtgcaagagacaaagaaagaagcagagatcctt
cagcatgttcagactgagaggatcaacagtcttctggagcagatatcttccttagaagaa
atagtatcagtgaacaaagatgcagcagagaagcttccagtcttgaagaatgaattggat
gtggtcaaccaatcccatgctgacctgaaaaagtctctagaagctcttgagaagagtcat
tcgtccactattgaaaccaagtccaacctggagaacaccctgactgagaaaattaaccag
gtctcagctttggagaaagaggtgaaagagctcacagagaagatgaataaagagtcagag
agtcacgctttagaggttgaaaatttcctcaacaaagagaacaaccttaaagagcagctt
gaagctgctaagcagtcagtaactgctgccaaagcagaattgaggtctcgtcgagaggag
atcaagaccatgaagacgactctgtctgctgcttcgcgcggcctcgaagagagagacaac
acaataaagtgcttaaaggagaagctgaataaagcagaggcagagcaggccaaaacctct
gacctcctgaaggagaaggtggtcgccatgaataaaatcaaggtgcagctggagatgctg
caaatggacctggaggacaatgaatcagccatgaactcttttgatggtcaggtggaggag
ctgaggggaactatagagttactggaggcccagcttgctcataaccagacccagatggct
gagatggaggccaggctggaggacagcaaaacccaggtctctgtcttggagtcacgcttg
gaggaggttcaatcccagaactctgtgctggagacgcagtatgtcacagctaaagaggag
ttattcgagaggagctgtgaaataactcgtctggaagaggatgctgccaaacgaatccag
ctggaggagagtgttgttgcattagagtctaaacttagtcagatcatagaggaaagcatg
aagttagaggcaactctcaggcaggtcactgaagagaaagaccgtaatctcaaccagttt
ctccaggagaaaaacagccttgagaccactttgaaacagttaacggacgacaaagagcaa
gtagaaaatgaaataattcaagtgaatgcagagaggaaacggctggaagccagtttagac
aagttaactgaggagaacaaacagctacagagcaacatcaggcaggtaactgaagaaaag
cagcaaacagaagcaaagattgaacaaatgactgctgagaaacttgaagctgaatcagtc
gttagccaaaccgctgagcagagagtgcagctagatgttaccctcaacctgataaatgag
gagaaaatccaacttgaggccaaacttagtgaactaacatctgagaaaaatgattttgtc
actaagttgaatcaagcagttgaggaaaagcttcagctggaaatgaactacaatcagctg
actgaggagaacacccaactacagtctagtgtgaatctagtaactgaagagaagctgcag
ttacaagaaaacatcgacaggcatgaatatgaggtgacttcacttaaagaggagaacgag
tgcattcagtgcttgctccaagcctcagagcaggagcaacagaggctgaaggagcagctg
gagatgatggacaagaggactgaggaggagaacacagagaggggccaccagtttgaggca
gagcaagcccaactgcatcagaacctggcaagcttacagaaggagctgactgtgttcaag
cagcaatacgagtcactgctggagcaggtgggccagcagcacagcctcatacagcagctc
tctgggtcgcagagccacatggagacagaaactggcatttccccagcagaaggagctgaa
cagattgatgtggagccaacaattgattcaagtgcaaatactgagtcctttgcagaaaag
ggacagctgagccctatgttgtctgaactgggtacaccttcctaccagtctgatgaggct
ttctgtgagacagagctggtcttcaaggaggacatcattgagcaagagatgatccaggaa
cagatggaggaggagaggcaggcacgcatggctgatgtagaggaaatgaggagtaaagat
gaggagaaactacaccacacagaacccttagatcaggttcctggagacagcagtagtacc
agagatgttcttgaaaatgaacctgaagtctatgaaatatctcaacccctgtcctcgtcg
agtgagaccatagagttaaaatcctgtgttgaggaattaaatgcaacagactcatctcag
ggacaagacgacctcacccattccaatgaaatgatcacaaaacaagaaaatgaactccag
acactgcgctcagagtttgacctactgagctccgaactggctctgagaaaggagctgacc
tctgaactggaagtccaggttcaaaacttggaaaagaaagttcatacagcagaggaggcg
gcgcatggtgcagcacagaaaatgaacgttgctctgcaggagaggaaagaccttgctgac
cagttggtgcagctgtcagaggagagggagacattaactctacagctacaaacagctaaa
tgccagttggctgatgttatagagatgctggaaggactggagatggccaaaggtggatgg
gatgagaagttccttcagcaggagagtgagttgaagagggttcgatctgagaaggctaac
ctggagcagcacatcctgggcatggagtctgagctggagaccctgcaggaggagaggacc
agattgaaagatgagacggagacacagaagaggacttgttcaggcatggagcagcaaata
gaaactctcaggacagagacaagccagctgagatctgagcttgtgtcctgctctgaagag
cgagatgagctgagccagtctttggggcaatggagagagaaagttcacagtctggagaag
acgaactgtgacaccagaaacctcatttccatcctggaggacgacatcagggcagggagg
aaggagtatgaagccctgcaaggcaacatggagaaactgcagacagagaggcaacagctg
gtggagcagattaaggcacaggagcaggcaatctctcagcagagtggggaaagagaggag
cttattggtcatcttaaccagatcaaagaagaccacacttctgccaatcaaaacactgag
tccatggtcagcaagatacaggctttagagggagaagtgtgtcgcttatcacagtctctc
gagtcctctctgttggagaaaggagagattgcatctcgtctgaactccacacaggatgag
gtccaagagatgaggaccggtattgaaaagcttcaggtccgcattgagtcagatgagaga
aagaaaaggaagatgggagagctgctcaaagctgcccagagaaagtcagactcactgcaa
gatcgcattgatgctctggagcgagagaaggaagatgtagagcaaagtctagaggaggct
gttctggaggctgagacagccaaagctgagctggaggaggaaaggagaaaggtggaagac
gagaagcagaggctcagcgagaaactatcagagctctctgccacgctggaaaacctgaga
tctgagaaagagcgcatggagagagagttggaagcaaaaaacagagagatagaagagctg
aaggccgctaaggagcaactggagagaggactggagaaggcagaggtagatagaagacag
gaagaggagaggcagaaatacagggtggaagagcttgagaaagggatgagagaggaagcg
cagagacaaattagacaagtagaggaactccatgcgcagctggaagcctctcggcagagg
gagatctcacttgaacgaaagggtgcagaaacagaaggggagaaagacagggtgcagtct
ctgttggtaaagatggagaaagagaaacagcatctgcaaacttctctggaggagtggcag
acagagggagagaggctccgctctaagggagatgagttggagaaggagagaaacaacctg
aagacccatattgaaggtttggaagaggaaattaaggagcttaaaatgctcataaaagcc
aaagaggaagagagagaggttttggaaaaggatagggaggaggaagcagtacagagacaa
gcctcggtaaaatccatctcctctcttatggcagagaaagaacagatagaaagagaaaat
ggacggctggtagaggaaaaagagaaactgcaatctaccttaatgtcagtggaagaagaa
agagatgacctgcgccttactcttgcatctgtagaagaagagaaagaaagactagggcga
gagagggaggtgttcgctgatgagaaagagaagctttctatgatagaaacagagaaacat
gacctggaacaaactctttcttcactcaagcaagagaaggagagaatagaagaggagaaa
cacaggttagaggctgaaaaagaggaattgcagtcttccctttctttgatcaaagtagag
aaagagaagatgtgctcagctctgtctgcgctggagaaagagaagcaaagagcagaagaa
gagaaagagaaactcacagaagaacgagagagccttcagtctacagttgcctctatggag
aaagaactggaagcacaaaaatcgtctgttgcacagttcaacgagcaggtgtcagagcta
gcatctcgtgccactcgtttgtccaaagagagagactctgctctgagcaagatgaatctt
tggatgaaaacctgcaaacagctggagcaggagaaagaaaagatgttaaacagctcagga
gatggaaagagcagtggggaggagcagacagaagtaaaccagctgaggatggaggagaaa
accaaggaggtggaagaaattaaggctgcccttgatgcaaagaggaaagagttagaagag
aggaataaagagctggaggagatgaagagtgagctgaatgaagtgaacaaacttctggaa
gagaagagcacagaggctgatgagagcatggataaatactgcagcctgatggttcaagtc
cacaaactggaagagaccaacaatgccctgacagcacggctggagcagattaccgctagc
caacgtgttaatgaggctaactccagcagcgctgtaggtgctctttgccgccgctcagga
aggaagtcttcctccaaacagcaggaagagaagacagtcgacaacaccgagaatgtggcg
ccttcaacgcctcagaggtcacctcaggggtcatcttcagggaaacggggtcaccgtgac
atcagtgataaagacagcgcccaggaggccctgcacaacctgacaaagaagatcaaagcc
aatgcagcgacacccaaaccaacaactgaacaggaagatgaggagttcaggccagagggc
cttcctgagctggtgcagagaggctttgctgatattcctctgggggaggcgagtccattc
atcatgaggagaaccacagtgaggcgctgcagtcctcggctggctgccaggcagactgat
cccacatctgcacctgacagcaagtttttggcgcccatagccttccagagtccctctgca
gaaggctccaacaggaagtgtctttctccgagcggcgaggagaaatctgtgggtcgttca
cggagcgtagggaaaacaccagagcagaaagagaaacaacttttaagagaacagactcaa
caagcagacaactgtcacgtgcagtag
DBGET
integrated database retrieval system