Lates calcarifer (barramundi perch): 108877023
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Entry
108877023 CDS
T04895
Symbol
ctsba
Name
(RefSeq) cathepsin B
KO
K01363
cathepsin B [EC:
3.4.22.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
lcf04142
Lysosome
lcf04210
Apoptosis
lcf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108877023 (ctsba)
04140 Autophagy - animal
108877023 (ctsba)
09143 Cell growth and death
04210 Apoptosis
108877023 (ctsba)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108877023 (ctsba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108877023 (ctsba)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108877023 (ctsba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108877023 (ctsba)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108877023 (ctsba)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.1 cathepsin B
108877023 (ctsba)
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C1: papain family
108877023 (ctsba)
Chaperones and folding catalysts [BR:
lcf03110
]
Intramolecular chaperones
Papain family
108877023 (ctsba)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of microglial cells
108877023 (ctsba)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Others
108877023 (ctsba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C1
Propeptide_C1
Motif
Other DBs
NCBI-GeneID:
108877023
NCBI-ProteinID:
XP_018522457
UniProt:
A0A4W6G0W8
LinkDB
All DBs
Position
LG2:complement(26695590..26702863)
Genome browser
AA seq
330 aa
AA seq
DB search
MWRAALLLLAASLSVSLARPHLKPLSSEMVNYINKINTTWKAGHNFHNVDYSYIRSLCGT
MLKGPKLPIMVQYAGDLKLPKSFDSREQWPNCPTLKEIRDQGSCGSCWAFGAAEAISDRV
CIHSGGKVNVEISSQDLLTCCDSCGMGCNGGYPSAAWDFWTKEGLVTGGLYNSHIGCRPY
TIEPCEHHVNGSRPPCTGEGGDTPQCIQQCESGYSPSYSEDKHYGKTSYSVEANEEQIQY
EIYKNGPVEGAFIVYEDFVLYKSGVYQHVYGSAVGGHAIKVLGWGEEDGVPYWLCANSWN
TDWGDNGYFKILRGSDHCGIESEIVAGIPK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgcagccctcctgctactggctgccagcctgtcggtgagcctggccagaccc
cacctcaaaccactgtccagtgagatggtcaactacatcaataagattaacactacatgg
aaggctggtcataacttccacaatgttgactacagttacatccggagcctgtgtggtacg
atgctgaagggacctaaactgccaatcatggttcagtatgctggagacctgaagctgcct
aaaagctttgactccagagagcagtggcccaactgtcccactctgaaggagatcagagac
cagggctcctgtggatcctgctgggcatttggtgctgctgaggccatctctgaccgtgtg
tgtattcacagtggtggcaaggtcaatgtggagatctcctcccaggatctgctgacctgc
tgtgacagctgtggcatgggatgtaatggtggctacccctcagctgcctgggacttctgg
acaaaagaaggtctggtcactggaggtctctacaactcccacattggttgccggccctac
accatcgaaccctgtgagcaccatgtgaatggtagcagacctccctgcactggagagggt
ggagacacaccccagtgcatccaacagtgtgaatctggatactcacccagctacagcgag
gacaaacattatggtaagacttcttacagcgtggaggcaaatgaggagcagattcagtat
gagatttataagaatggcccagtggagggagccttcatcgtctatgaagactttgtactg
tacaagtccggtgtgtatcagcatgtgtatggatctgctgtgggtggacatgccatcaag
gtcctgggctggggagaggaggatggtgttccctactggctctgtgccaactcctggaat
actgactggggtgataacggatacttcaaaatcctgcgtgggtcagatcactgtggtatt
gagtctgagattgtggcaggcattcccaaataa
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integrated database retrieval system