Lates calcarifer (barramundi perch): 108877037
Help
Entry
108877037 CDS
T04895
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108877037 (igdcc4)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
108877037 (igdcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Adeno_E3_CR2
Ig_C17orf99
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
108877037
NCBI-ProteinID:
XP_018522481
UniProt:
A0A4W6EN63
LinkDB
All DBs
Position
LG2:23569901..23617411
Genome browser
AA seq
1256 aa
AA seq
DB search
MAVESTIWLFCLLSLFCGPSKQEKPVSVELSCGAGPSHVVLEPGLPLLLDCNLGASNTPF
NVTWLKDGQTLPLEGDDYLQYLGNGSLLLLPTSKDGQSAQDLEGGYSCVSASALGALTSR
TVNVLLSSLSKFHQEPSPQTVPAGGAARFECQIEGVPTPVITWEKNKVAVPEETRFISLP
NGVLQILDVTKEDEGAYRCVASNSARKDISYEARLTVTTGSTEALNRVVIVAPPQNATVV
LGRPAVMECMAQGQPKPLVSWSRQDGKPISTDVVVLATNLVIRDTRRHHAGVYVCRANKP
KTREFVIAAAELHVPAPPVILQPPETMSLSRGNTARFVCNSSGEPPPVLHWLKNGQPIKS
FRRVKTQSPGVLLINQLAQEDGGYYQCIADNGLGTACATAKLTVIVREGLPSPPRHLTAT
PYSSTAALLMWEKPEYNSDQIIGYSVHCQLAAGSDNAEYQFAMNNDTTEYHVKELLPHTA
YTFFVVAYSPMGASSPSLPVTVEMLEDVPSAPPQLSIASTSPTEIRLMWHPLSSQHSRGA
VTRYCIEYGSLDQDEVLSAEVGGNETQFTLRELQPNQVYRLRIAAGTGIGFGVPSEWAQH
KTLARHSNHSMVIFAPTELKVRARADSLNVTWQPSPNHTLVSGYMLSCREVEAEESANGE
RTTQTHTIRLRKRLRHRLLTGLVPDRQYEVKVWAFSKQIDGAAAVWKGRTDKASDRTPLL
PTHPLLLPPSSIQATANSSTSIWLRWEKPRFSNVRIINYTVRCSPVGTTNASLVSYLTSS
AQEMLLGALKPFTRYELAVQSIGENAVGPFSGTVEESTLSDRPSTPPEELQLSALDSSSV
LVSWRPPLEPNGIIISYMILYSGNLSQPEHLWKNLSQDGSITSVEVQGLSSGTHYFFKLG
ASTEVGPGPYSPVKDVHTPPQKYELDIHAVTGIIVGVCLGLICILLCMCFSFRNSKSREI
SGGLDSTAVTLQYRRGGCPTVPSNLPECSDSYELETLMPSGSQESGQPPEEAPEEQSLMA
SANPVEGEDAPAPEPKAAWNGSVSHNWVNRITRYRDTITEDSPTLINGAPNMLITDNSTG
SEDHLSTSLCSNQVEAEVIVHSELSDPGREKEEEGSKREKDSNTTRGPSLSEDRYSPLNQ
PSLSGEEESVEKLPLAQSPSRFPSIKLMGNHNGELESMGDKPIADTEPQQDMGLTNGFHS
PKTVRSVLRSEHLENGDSRHCSTAPGKAITVGLSPAPFVSSGLVHSTSAAHSYLCP
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagagtacaatttggctgttctgtcttctttcgctgttttgtggtccatcc
aagcaagaaaagcctgtttcggtggagctgagctgcggggctgggcccagccatgtagtg
ttggaaccaggtttgcccctcttgctggactgcaatctaggggccagcaatacacctttc
aatgtgacctggcttaaggatggccagaccctgcctctggaaggggatgactatctgcag
tatttgggcaacggatccctcctcctgctgccgacctccaaggacggccagtctgcccag
gacctggaagggggctacagctgcgtgagtgccagcgcccttggagccctgaccagccgg
actgtaaatgtactcttgtcaagtctgtctaagttccatcaggagccatcaccccaaaca
gtgcccgctgggggagctgcccgcttcgagtgccagattgagggagtacccacgcctgtt
attacctgggaaaagaacaaagtggctgtccctgaggagacaaggttcatttcccttcct
aatggggtgctccagattctagatgtgaccaaggaggatgagggtgcctaccgctgtgtc
gcgtccaactctgccaggaaggacatcagttatgaagcgagactcactgtcaccacaggc
tctactgaagccctgaacagagttgtgattgttgcaccaccccagaatgccacagtggtg
ctcggccgccccgctgtgatggagtgtatggcacaaggccagcccaaaccactggtgtcc
tggagcagacaagatggaaagcccatttccactgatgtggttgtcctcgcaacaaacctg
gtgattagggacacaaggcgtcaccatgctggcgtctatgtctgccgggccaacaagccc
aagaccagagagtttgtcattgctgctgctgaactgcatgtgcccgcccctccagtgatt
ctccagcccccagagactatgtctctctcccggggaaacacagccaggtttgtgtgcaac
agctccggggagcctcctccagtgctgcattggctgaagaacggccaacccatcaaatca
ttcagacgagtgaagacccagagccctggagtcctgctcatcaaccagctggcacaggag
gatgggggctactaccagtgcatagcagacaacgggctgggcacggcctgtgccactgcc
aagctgacggtcattgtgagggaaggactgcccagccctcctcgtcacctgactgctaca
ccctactccagcacagctgccctgctcatgtgggagaaacctgagtacaactcagaccaa
atcatcggctattctgtgcactgccagctcgctgcaggctcagataacgcagagtaccag
tttgcaatgaacaacgacaccacagagtatcacgtcaaagaacttctcccccatactgcc
tacacattctttgtcgtggcttattctcccatgggtgccagtagcccatccctgcctgtt
actgtagagatgctggaggatgtgccgagtgcacctcctcagctgtctatagccagcacc
tcccccacagaaatcaggctgatgtggcatccattgtcctcgcagcacagtcgaggagct
gttacccgctactgcattgagtacggctctttggatcaggatgaggtgttgtcagcggag
gtggggggtaatgagactcaatttacactgagagaactgcagcctaaccaggtctaccgg
ctgagaatagcagctggaacaggcattggctttggagtcccatctgagtgggcccagcac
aaaacattagcccgccacagcaaccacagcatggtgatctttgcccccactgagctgaaa
gtcagagccagagcggacagtctcaatgtgacatggcaaccctcacctaatcacacactg
gtctctggttacatgctgtcctgtcgagaagtagaggctgaggagtcagccaatggagag
aggaccacacaaacccacaccatcaggctgcgaaagaggcttaggcatcgactgctcacg
gggctggtccctgatcggcagtatgaggtaaaggtttgggcattcagtaagcagatagat
ggagcagctgcagtgtggaagggaaggacagacaaggccagtgacagaacaccgttgctg
cctacgcacccccttctattgccgccaagcagcatccaagccacagccaacagttccacc
tccatctggctgcgatgggagaaaccacggttcagcaacgttcgcatcatcaactataca
gtgcgctgcagcccagtaggaaccaccaacgcctcccttgtctcctatcttaccagctct
gctcaggagatgctgctcggggcactgaaacccttcacccgttatgagctggcggtacag
tctattggagagaatgcagtgggacccttcagcggcactgtggaggagtccactttgtct
gaccggccctccacacctccagaggagctgcagctgagtgcgctggactcctcttctgtg
ctggtgagctggcgccctccactggagcctaatggtatcatcattagctacatgatcttg
tacagtggcaacctcagccagcctgagcacttatggaaaaatctctctcaggatgggagc
atcaccagcgtggaggtccagggtttgtccagtggcactcattacttttttaaattggga
gcatctactgaggtggggccggggccttattcacctgtaaaggatgttcacactccccct
cagaaatatgagctagacatccacgcagtgacaggcatcatagtcggtgtctgtcttgga
ctgatatgcatcctcctctgcatgtgtttcagctttcgcaacagcaaatccagggagata
tctgggggcttggactccacagctgtgacccttcagtacaggagaggaggctgccccaca
gtaccctccaacttgccagagtgcagcgatagctacgagctggagacactgatgccctca
ggcagccaagagtctggtcagccgccagaagaggccccagaggagcagagcctgatggcg
agtgctaatccagtggaaggggaggatgcccctgcacctgaacccaaggctgcttggaac
ggctctgtgagtcataattgggtcaacagaatcactagatacagagacaccataacagaa
gactctccaacactcattaatggagctcccaacatgctaattactgataacagcacgggc
tcagaagatcatctgagtacatccctgtgcagtaaccaggtcgaggcagaagtcatcgtt
cactcagagctgtcagatcccgggagagagaaagaggaggagggcagcaagagggagaag
gattctaacaccaccaggggaccctcattatcagaggaccgatactcccctttgaaccag
ccaagcctgtcaggagaggaggaatctgtagagaaactgccactggcccaaagcccctca
cgttttccctcaattaaattgatgggtaaccacaatggggagctagaaagcatgggagac
aagccgattgcagacacagagccacagcaggacatggggcttaccaatggcttccactcc
cctaaaactgtgaggtctgtgctgaggtcagagcatctggagaatggggactccagacac
tgctctactgcaccagggaaggccatcactgtcgggctgtcccctgccccctttgtcagc
tctggccttgtccactctacctcagcagcacacagttatctgtgcccgtag
DBGET
integrated database retrieval system
