Lates calcarifer (barramundi perch): 108877054
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Entry
108877054 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: MAGUK p55 subfamily member 6b
KO
K28619
MAGUK p55 subfamily member 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108877054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108877054
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
PDZ domain-containing proteins
MAGUK family proteins
108877054
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_2
SH3_1
PDZ_2
PDZ_6
PDZ_Tricorn
SH3_9
VWA_N2
Motif
Other DBs
NCBI-GeneID:
108877054
NCBI-ProteinID:
XP_018522504
UniProt:
A0AAJ7LHM9
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Position
LG3:8737133..8756941
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AA seq
582 aa
AA seq
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MVTAMEDACPNGVREEEVTPLGQTGMEGPPAARSTQGADTSGAMQQVLDNVGELPTSTGA
KDIDLLFLRGIMESPIVRSLDKAHEQLEEVKLEAVQDNNVELVTEILGDISNLKVKDDSA
AELSRILQEPHFQSLLEAHDMVASKCYEVPPPAEATNDAAVNNALMQADAVRMIGIRKKA
GEPLGVTFRVEKDDLVIARILHGGMIDRQGLLHVGDIIKEVNGKDVGNNPTELQEMLKDC
SGGITLKILPSYRDAPAPPQVYVRPYFDYNPANDNLIPCREAGMAFKKGDILQIVNREDP
NWWQACHVVGGATGLIPSQFLEEKRKAFVPRDFDGSGILCGTIAGKKKKKMMYLTAKNAE
FDRHELQIYEEVAKVPPFQRKTLVLIGAQGVGRRSLKNRLMVLQPTRFGTTIPYTSRRAR
DDELDGNTYHFTSRTEMEVDVKAGCFLEHGEYDGNLYGTKIDSIHEVVATGRTCILDVNP
QALKVLKTAEFMPYVVFIAAPDFDTLKAMHKAVVDAGITTKQLTDVDLRKTVDESARIQR
AYSHYFDLTIVNDNLDRAFETLQAAVDKLCSEPQWVPVNWVY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagctatggaggatgcctgtcccaatggggtacgggaggaggaggtgacgccc
ctgggacagactggcatggaggggcccccggctgcgcggtccacccagggagcagatacg
tctggagccatgcagcaggtgttggataatgtgggtgagctgcccacctccacgggcgcc
aaagacatcgacctgctcttcctgcgcggcatcatggaaagtccaattgtacgctccctg
gataaggctcacgaacagctggaggaggtgaagctggaggcggtgcaggacaacaacgtg
gagctggtgacggagatcctgggcgacatcagcaacctcaaggttaaagacgacagcgca
gccgaactgtccaggattctgcaggagccgcacttccagtcccttttggaggcacatgac
atggtggcctcaaagtgctacgaagtcccgcccccggccgaggcgaccaatgacgcggct
gtgaacaatgctctgatgcaggctgatgccgtgcgcatgattggcatccgaaagaaagct
ggagagccactgggcgtgacatttcgcgtggagaaggacgacctggtcattgccagaatc
ctgcacggcggcatgattgacaggcagggcctgctgcacgtgggcgacatcataaaggaa
gtgaacgggaaggatgtcggcaacaaccccaccgagctgcaggagatgctcaaagactgc
agcggggggatcacgctgaaaatactcccgagctaccgagacgctcccgcacctccacag
gtgtacgtgaggccatactttgactacaacccagccaatgacaacctgatcccttgtcga
gaggcggggatggccttcaagaaaggcgacatccttcagatcgtcaacagagaggatccc
aactggtggcaggcatgtcatgtggtgggtggggccacagggctgatacccagtcagttc
ttggaggagaagaggaaagcttttgtccctcgagactttgatggatcagggatcctttgt
ggcaccatagctggaaaaaagaagaagaagatgatgtacctgacagccaagaatgcagag
tttgacagacatgagctgcagatctatgaggaagtggcaaaagtgccaccattccagagg
aagacgctggttctgattggtgcgcagggagtgggtcggcgcagcctgaaaaacagactg
atggtccttcaacccacccgtttcggcacaaccataccatacacttcacggcgagctcgt
gatgatgagctggacggcaacacctaccacttcaccagcaggacggagatggaggtggac
gtgaaggccggctgcttcctggaacacggcgagtatgacggcaacctctatggcaccaag
atcgactctatccatgaggtggtggccacaggacgcacctgcatcctggatgtcaaccca
caggctctgaaggtactgaaaacagcagagttcatgccttatgtggtgttcatagcagcg
ccggattttgatacactcaaggccatgcacaaagctgtggtggacgcgggcatcacaact
aagcagctcacggatgtggacttgaggaagacggtggacgagagcgcccgcatccagagg
gcttacagccactacttcgacctgaccatcgtcaacgacaacctggacagggcctttgag
acgttacaggccgctgtggacaaactgtgcagtgaaccccagtgggtcccagtgaactgg
gtgtactga
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